Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00024701m |
Family | GT8 |
Protein Properties | Length: 251 Molecular Weight: 28779.1 Isoelectric Point: 6.9457 |
Chromosome | Chromosome/Scaffold: 036545 Start: 5594 End: 6749 |
Description | galacturonosyltransferase 9 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 50 | 222 | 6.5e-39 |
VALLDYLRFYLPEMFPALRRVVLLEDDVVVQRDLAGLWRVDMGAAVNAALHTCFGGFRRYGKYLNFSDPVVQESFSPRACAWSYGVNVFDLQAWRREQCT EQFHRFMEMNENGTLWDPASVLPVGLMTFYGKTKPLDKSWHVTGLGYNPHIRPEDISGAAVIHFNGNMKPWLD |
Full Sequence |
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Protein Sequence Length: 251 Download |
MYLPAFRVWF ARHPPPLGAH VQLLSVSDFP FLNASYSPVL RQIEGGSRDV ALLDYLRFYL 60 PEMFPALRRV VLLEDDVVVQ RDLAGLWRVD MGAAVNAALH TCFGGFRRYG KYLNFSDPVV 120 QESFSPRACA WSYGVNVFDL QAWRREQCTE QFHRFMEMNE NGTLWDPASV LPVGLMTFYG 180 KTKPLDKSWH VTGLGYNPHI RPEDISGAAV IHFNGNMKPW LDVAFNQYKH LWTKYVDTEM 240 EFLTLCNFGL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02718 | PLN02718 | 4.0e-72 | 3 | 247 | 249 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 2.0e-76 | 5 | 247 | 269 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02742 | PLN02742 | 3.0e-79 | 4 | 248 | 267 | + Probable galacturonosyltransferase | ||
PLN02829 | PLN02829 | 7.0e-85 | 5 | 247 | 265 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 2.0e-114 | 1 | 250 | 275 | + galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD37314.1 | 0 | 1 | 250 | 255 | 504 | glycosyl transferase protein A-like [Oryza sativa Japonica Group] |
GenBank | EAY87516.1 | 0 | 1 | 250 | 244 | 493 | hypothetical protein OsI_08922 [Oryza sativa Indica Group] |
GenBank | EAZ24604.1 | 0 | 16 | 250 | 238 | 472 | hypothetical protein OsJ_08366 [Oryza sativa Japonica Group] |
RefSeq | NP_001048110.1 | 0 | 1 | 250 | 244 | 493 | Os02g0745400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002454284.1 | 0 | 1 | 250 | 243 | 492 | hypothetical protein SORBIDRAFT_04g028010 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE628867 | 237 | 1 | 237 | 0 |
EB158732 | 251 | 1 | 251 | 0 |
DR809339 | 251 | 1 | 251 | 0 |
CI138829 | 200 | 52 | 251 | 0 |
CK073824 | 212 | 4 | 215 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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