Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00024822m |
Family | GT90 |
Protein Properties | Length: 288 Molecular Weight: 33413.8 Isoelectric Point: 6.5141 |
Chromosome | Chromosome/Scaffold: 0361781 Start: 264 End: 1206 |
Description | Arabidopsis thaliana protein of unknown function (DUF821) |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT90 | 1 | 211 | 0 |
YCKNDSALGIVFPDWTFWGWPEVNIRPWAPFLEEVERESRRVPWHYREPYAFWKGNPDVGGLRSDLMRCNGSDWNARLVRQDWEDADRNGFKDSNLAKQC TYRYKIYVQGRTWSVSQKYILACGSPMLRIQTSFDDFFSRGLVAGKHYWPIDADGMCPSIKSAVDWGNAHPVQAQRMGEEGSSFARDELSMDYVYDYMLH QLAQYARLLRY |
Full Sequence |
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Protein Sequence Length: 288 Download |
YCKNDSALGI VFPDWTFWGW PEVNIRPWAP FLEEVERESR RVPWHYREPY AFWKGNPDVG 60 GLRSDLMRCN GSDWNARLVR QDWEDADRNG FKDSNLAKQC TYRYKIYVQG RTWSVSQKYI 120 LACGSPMLRI QTSFDDFFSR GLVAGKHYWP IDADGMCPSI KSAVDWGNAH PVQAQRMGEE 180 GSSFARDELS MDYVYDYMLH QLAQYARLLR YRATVPKNAT ELCLESMACP ADGRAGEFMM 240 ESREKYVADY EPCSLPPPFT LYYKVGKRVG EVGSKVKRME EQEWKET* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05686 | Glyco_transf_90 | 6.0e-26 | 1 | 60 | 60 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
pfam05686 | Glyco_transf_90 | 1.0e-36 | 167 | 280 | 116 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
smart00672 | CAP10 | 2.0e-80 | 1 | 211 | 220 | + Putative lipopolysaccharide-modifying enzyme. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ05278.1 | 0 | 1 | 287 | 285 | 579 | hypothetical protein OsI_27481 [Oryza sativa Indica Group] |
RefSeq | NP_001060764.1 | 0 | 1 | 287 | 285 | 579 | Os08g0101800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149452.1 | 0 | 1 | 279 | 306 | 594 | LOC100283078 [Zea mays] |
RefSeq | XP_002437850.1 | 0 | 1 | 280 | 267 | 551 | hypothetical protein SORBIDRAFT_10g003730 [Sorghum bicolor] |
RefSeq | XP_002443683.1 | 0 | 1 | 279 | 301 | 588 | hypothetical protein SORBIDRAFT_07g000280 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY357347 | 252 | 11 | 259 | 0 |
EH727898 | 262 | 1 | 259 | 0 |
HX130341 | 190 | 71 | 260 | 0 |
ES433306 | 256 | 34 | 284 | 0 |
DV690969 | 264 | 1 | 260 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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