Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00024996m |
Family | GT34 |
Protein Properties | Length: 271 Molecular Weight: 29763 Isoelectric Point: 8.7974 |
Chromosome | Chromosome/Scaffold: 0362766 Start: 2 End: 1064 |
Description | Galactosyl transferase GMA12/MNN10 family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT34 | 16 | 161 | 0 |
ERVVMVSGSQPEPCPGEAGDHLLLRFLKNKLDYCRLHGIELLYNRDVLQPAMTGAWAKIPIVRAAMLAHPEAEWVWWVDSDAVLTDMDFSLPLAARYAGR NFVAYGWPDKIARRSWLGINNGVFLLRNCQWSLDLLDEWARMGPAT |
Full Sequence |
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Protein Sequence Length: 271 Download |
RVAWLRSRGF ARASPERVVM VSGSQPEPCP GEAGDHLLLR FLKNKLDYCR LHGIELLYNR 60 DVLQPAMTGA WAKIPIVRAA MLAHPEAEWV WWVDSDAVLT DMDFSLPLAA RYAGRNFVAY 120 GWPDKIARRS WLGINNGVFL LRNCQWSLDL LDEWARMGPA TRSTRGAGAP RYAAARNAAV 180 GGDAVPGPAG GGVEGWRRPL ITHFVGCQPC SGGRNPMYSR ESCDDGMRRA LGFADDQVLR 240 AYGFRHAAPL NDTMLPVPFD YPAAAPARND * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03182 | PLN03182 | 6.0e-16 | 197 | 248 | 52 | + xyloglucan 6-xylosyltransferase; Provisional | ||
PLN03181 | PLN03181 | 4.0e-37 | 196 | 265 | 71 | + glycosyltransferase; Provisional | ||
pfam05637 | Glyco_transf_34 | 4.0e-47 | 16 | 156 | 166 | + galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34. | ||
PLN03182 | PLN03182 | 9.0e-78 | 1 | 159 | 163 | + xyloglucan 6-xylosyltransferase; Provisional | ||
PLN03181 | PLN03181 | 4.0e-91 | 1 | 161 | 163 | + glycosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0016021 | integral to membrane |
GO:0016758 | transferase activity, transferring hexosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY82266.1 | 0 | 1 | 246 | 141 | 429 | hypothetical protein OsI_37474 [Oryza sativa Indica Group] |
RefSeq | NP_001152534.1 | 0 | 1 | 161 | 117 | 278 | glycosyltransferase 6 [Zea mays] |
RefSeq | NP_001152534.1 | 9e-28 | 194 | 264 | 402 | 472 | glycosyltransferase 6 [Zea mays] |
RefSeq | XP_002449648.1 | 0 | 1 | 161 | 97 | 261 | hypothetical protein SORBIDRAFT_05g020910 [Sorghum bicolor] |
RefSeq | XP_002449648.1 | 6e-35 | 186 | 264 | 366 | 444 | hypothetical protein SORBIDRAFT_05g020910 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xyloglucan biosynthesis | RXN-12415 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
xyloglucan biosynthesis | RXN-9461 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EC875456 | 163 | 1 | 161 | 0 |
DR826165 | 163 | 1 | 161 | 0 |
DR805912 | 163 | 1 | 161 | 0 |
DV533702 | 163 | 1 | 161 | 0 |
EE157588 | 163 | 1 | 161 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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