| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00025005m |
| Family | GT43 |
| Protein Properties | Length: 337 Molecular Weight: 36233.8 Isoelectric Point: 7.0188 |
| Chromosome | Chromosome/Scaffold: 036171 Start: 2165 End: 3475 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT43 | 77 | 309 | 0 |
| LAHTLRHVAPPLLWIVVGAENRTATARAVRVLRGTGVMFRHLTYDARNFTDAGAGDEVDHQRDVALSHIERHRLNGVVHLAGASSIYDFRFFQELRQTRG FAAWPVATISPAEQKITEQGPTCNSSQITGWYSKDSSTNGTERTSTSSDAVDTSASNRNSSSEPLKINISGIGFRSSILWDSGRSLVRRTSSAGASTQDF IQIVRQMAVEGENKLKGVTSDCSESQIMLWHLD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 337 Download |
| MIEAAVHLSL CFTVGALAAL APLAATGASF IGPFNNAPRA VAAAAAPPPA PDLGLLLIVT 60 VTRGDGGMEQ DASLVRLAHT LRHVAPPLLW IVVGAENRTA TARAVRVLRG TGVMFRHLTY 120 DARNFTDAGA GDEVDHQRDV ALSHIERHRL NGVVHLAGAS SIYDFRFFQE LRQTRGFAAW 180 PVATISPAEQ KITEQGPTCN SSQITGWYSK DSSTNGTERT STSSDAVDTS ASNRNSSSEP 240 LKINISGIGF RSSILWDSGR SLVRRTSSAG ASTQDFIQIV RQMAVEGENK LKGVTSDCSE 300 SQIMLWHLDM PRFTLIPEEQ ETQLQQSIVV TGERQR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03360 | Glyco_transf_43 | 2.0e-33 | 77 | 308 | 241 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 2.0e-44 | 55 | 308 | 257 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| PLN02458 | PLN02458 | 2.0e-66 | 54 | 311 | 259 | + transferase, transferring glycosyl groups | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB08184.1 | 0 | 4 | 175 | 17 | 189 | unnamed protein product [Oryza sativa Japonica Group] |
| DDBJ | BAD61436.1 | 0 | 4 | 335 | 17 | 367 | beta3-glucuronyltransferase -like [Oryza sativa Japonica Group] |
| GenBank | EAY72617.1 | 0 | 4 | 335 | 17 | 367 | hypothetical protein OsI_00481 [Oryza sativa Indica Group] |
| GenBank | EAZ10617.1 | 0 | 114 | 314 | 1 | 219 | hypothetical protein OsJ_00448 [Oryza sativa Japonica Group] |
| RefSeq | XP_002457311.1 | 0 | 2 | 328 | 15 | 350 | hypothetical protein SORBIDRAFT_03g005410 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2d0j_D | 0.000000002 | 70 | 320 | 17 | 236 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_C | 0.000000002 | 70 | 320 | 17 | 236 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_B | 0.000000002 | 70 | 320 | 17 | 236 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_A | 0.000000002 | 70 | 320 | 17 | 236 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 1v84_B | 0.000000003 | 70 | 185 | 17 | 141 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
