| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00025159m |
| Family | GH5 |
| Protein Properties | Length: 508 Molecular Weight: 55446.4 Isoelectric Point: 8.263 |
| Chromosome | Chromosome/Scaffold: 035918 Start: 2 End: 2962 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 43 | 355 | 2.69999e-40 |
| IVDERGRRVKLACVNWPSHLEPVLAEGLGHRPLGAIAAGVAAMGFNCVRLTWPTFLATDASYASLTVAESLRRLNLTDALAGIGAHNPGVADLSLVDAFG AVVRALGASGVMVILDNHVRRPGWCCRANDGNGFFGDADFDPEVWIDGLAKMAAMFAGADNVVGMSIRNELRGSRQNTGDWYRYMQRGAEAVHAANPRVL IILSGLNNDNDLSFLNQRPVHLSFSHKVAFEVHWYSFSDPHQWASGNANRVCARVAASVARRTLYLLDRGWPVFLSEFGVDNRGGNVADNRYWGCVAAAA AGLDLDWALWALQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 508 Download |
| MTRLLVAACL AAVLAVAWPC RCHEPVEQAA ALPRSLSTSS RWIVDERGRR VKLACVNWPS 60 HLEPVLAEGL GHRPLGAIAA GVAAMGFNCV RLTWPTFLAT DASYASLTVA ESLRRLNLTD 120 ALAGIGAHNP GVADLSLVDA FGAVVRALGA SGVMVILDNH VRRPGWCCRA NDGNGFFGDA 180 DFDPEVWIDG LAKMAAMFAG ADNVVGMSIR NELRGSRQNT GDWYRYMQRG AEAVHAANPR 240 VLIILSGLNN DNDLSFLNQR PVHLSFSHKV AFEVHWYSFS DPHQWASGNA NRVCARVAAS 300 VARRTLYLLD RGWPVFLSEF GVDNRGGNVA DNRYWGCVAA AAAGLDLDWA LWALQGSYYL 360 REGVAGHDEA YGVLDHAWLR ARNGTALRRL RALQRPFRGP GLAEAPPYQV LFHPATGLCV 420 VRRRPPALPL DLALPEQPLE LGPCNETEAW EYNREHRLVL RDTWLRLCLR ADGAGRPVRL 480 GLGRAGCAGA QARWLLASDS KLHVAVEV |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 2.0e-13 | 74 | 331 | 264 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF79301.1 | 0 | 20 | 507 | 25 | 500 | unknown [Zea mays] |
| GenBank | EEC77495.1 | 0 | 41 | 507 | 36 | 492 | hypothetical protein OsI_16343 [Oryza sativa Indica Group] |
| GenBank | EEE61202.1 | 0 | 41 | 507 | 36 | 492 | hypothetical protein OsJ_15212 [Oryza sativa Japonica Group] |
| RefSeq | NP_001130915.1 | 0 | 20 | 507 | 25 | 500 | hypothetical protein LOC100192019 [Zea mays] |
| RefSeq | XP_002446675.1 | 0 | 35 | 507 | 37 | 505 | hypothetical protein SORBIDRAFT_06g020270 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.00000000005 | 38 | 322 | 8 | 285 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.00000000005 | 38 | 322 | 8 | 285 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.00000000007 | 38 | 322 | 8 | 285 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.00000000007 | 38 | 322 | 8 | 285 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
