Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00025664m |
Family | GH17 |
Protein Properties | Length: 348 Molecular Weight: 36786.7 Isoelectric Point: 5.9567 |
Chromosome | Chromosome/Scaffold: 0245194 Start: 822 End: 1865 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 26 | 346 | 0 |
VGVNYGRVANDLPDPASVVQLLKQNGITMVKLYDANPKVLASLANTGIKVMVMLPNEEVAAAAADPAYALRWARANVAAYRPATQIHAVAVGNEVFDSRP DLNTKLVPAMANVQDALAQLGLADAVKVTTPIAFSAVTDSYPPSSGRFRDDIAQTVMKPMLKFLDRTGSYLTINIYPFLAYADHPDQISLDYALGNTNPG ARGGDAATAGLLDAALLENNGVRDDDTGLVYYSLLDAQLDATYYAMDDMGFPSLKAYLGETGHSSGGKRQRAGKPPRRGRRHLMAGDDDVATVANAHAYI NNVINRVLSGNTGTPHRPGAD |
Full Sequence |
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Protein Sequence Length: 348 Download |
MAALARFLVT VLAAALATNV AGAGEVGVNY GRVANDLPDP ASVVQLLKQN GITMVKLYDA 60 NPKVLASLAN TGIKVMVMLP NEEVAAAAAD PAYALRWARA NVAAYRPATQ IHAVAVGNEV 120 FDSRPDLNTK LVPAMANVQD ALAQLGLADA VKVTTPIAFS AVTDSYPPSS GRFRDDIAQT 180 VMKPMLKFLD RTGSYLTINI YPFLAYADHP DQISLDYALG NTNPGARGGD AATAGLLDAA 240 LLENNGVRDD DTGLVYYSLL DAQLDATYYA MDDMGFPSLK AYLGETGHSS GGKRQRAGKP 300 PRRGRRHLMA GDDDVATVAN AHAYINNVIN RVLSGNTGTP HRPGADMD |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 3.0e-63 | 26 | 344 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001048260.1 | 0 | 1 | 348 | 1 | 314 | Os02g0771700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151472.1 | 0 | 3 | 348 | 2 | 345 | hydrolase, hydrolyzing O-glycosyl compounds [Zea mays] |
RefSeq | XP_002462967.1 | 0 | 3 | 348 | 2 | 350 | hypothetical protein SORBIDRAFT_02g035480 [Sorghum bicolor] |
RefSeq | XP_002462968.1 | 0 | 20 | 348 | 23 | 341 | hypothetical protein SORBIDRAFT_02g035490 [Sorghum bicolor] |
RefSeq | XP_002462970.1 | 0 | 3 | 348 | 2 | 349 | hypothetical protein SORBIDRAFT_02g035520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 348 | 1 | 277 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 6.02558e-44 | 25 | 343 | 1 | 275 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 6.02558e-44 | 25 | 343 | 1 | 275 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 6.02558e-44 | 25 | 343 | 1 | 275 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 6.02558e-44 | 25 | 343 | 1 | 275 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |