Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00025676m |
Family | GH9 |
Protein Properties | Length: 481 Molecular Weight: 51029.3 Isoelectric Point: 6.6983 |
Chromosome | Chromosome/Scaffold: 024049 Start: 3229 End: 5225 |
Description | glycosyl hydrolase 9B12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 31 | 475 | 0 |
DYRAALANSLLYFEGQRSGRLPVSQRVQWRGDSALADGRDHGVDLTGGYYDSGDNVKFGLPMAFTVTMLAWGVVEHARPLEAAGELRNALAAVRWGADYL ARAHAAEETLYVQVGDGDSDHSCWQRPEDMDTPRTAYSVDASRPGSDVAAETAAALAASAVAFRRLDAGYSAALLGHAEQLFRFAKNRRGLYHNSVPGAG EFYPSSGDEDELIWAAVWLFVATGREDYKAFIAGDGNGGGVQSTLSWDKKFVGAQALLILQGKLPDAGNPAAMKRSLEQFLCNLVQHGGDAERSPGGMLW VQPWNNMQYVTSAAFVAAAHADHLAGASLRCGGAAQLLSFARSQVDYILGVNPGRMSYMVGYGPRFPAQVHHRGASVPSIKYSPGKITCKGGFDYFSKST PNPNVLVGAIVGGPDGNDHYNDSRQNFKQAEPSTVTVAPIVGVLA |
Full Sequence |
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Protein Sequence Length: 481 Download |
MGSMVRLLAA AGLAALCCLG CAISSGDGQP DYRAALANSL LYFEGQRSGR LPVSQRVQWR 60 GDSALADGRD HGVDLTGGYY DSGDNVKFGL PMAFTVTMLA WGVVEHARPL EAAGELRNAL 120 AAVRWGADYL ARAHAAEETL YVQVGDGDSD HSCWQRPEDM DTPRTAYSVD ASRPGSDVAA 180 ETAAALAASA VAFRRLDAGY SAALLGHAEQ LFRFAKNRRG LYHNSVPGAG EFYPSSGDED 240 ELIWAAVWLF VATGREDYKA FIAGDGNGGG VQSTLSWDKK FVGAQALLIL QGKLPDAGNP 300 AAMKRSLEQF LCNLVQHGGD AERSPGGMLW VQPWNNMQYV TSAAFVAAAH ADHLAGASLR 360 CGGAAQLLSF ARSQVDYILG VNPGRMSYMV GYGPRFPAQV HHRGASVPSI KYSPGKITCK 420 GGFDYFSKST PNPNVLVGAI VGGPDGNDHY NDSRQNFKQA EPSTVTVAPI VGVLARLLHN 480 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02340 | PLN02340 | 2.0e-162 | 31 | 477 | 468 | + endoglucanase | ||
PLN02613 | PLN02613 | 1.0e-165 | 26 | 478 | 464 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 2.0e-169 | 31 | 475 | 457 | + Glycosyl hydrolase family 9. | ||
PLN02171 | PLN02171 | 4.0e-170 | 25 | 477 | 473 | + endoglucanase | ||
PLN00119 | PLN00119 | 0 | 23 | 477 | 466 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD28258.1 | 0 | 31 | 477 | 25 | 479 | AF128404_1 cellulase homolog [Nicotiana alata] |
EMBL | CBI25463.1 | 0 | 31 | 477 | 24 | 482 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001054543.1 | 0 | 7 | 478 | 1 | 510 | Os05g0129200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002269618.1 | 0 | 31 | 477 | 24 | 480 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002440523.1 | 0 | 6 | 477 | 5 | 482 | hypothetical protein SORBIDRAFT_09g002490 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 31 | 478 | 4 | 429 | A Chain A, Structure Of The Chitinase From Jack Bean |
PDB | 1ksc_A | 0 | 31 | 478 | 4 | 429 | A Chain A, Structure Of The Chitinase From Jack Bean |
PDB | 1ks8_A | 0 | 31 | 478 | 4 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 31 | 479 | 5 | 442 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 31 | 479 | 5 | 442 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |