Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00026147m |
Family | GT37 |
Protein Properties | Length: 456 Molecular Weight: 50845.8 Isoelectric Point: 8.1946 |
Chromosome | Chromosome/Scaffold: 0238607 Start: 414 End: 1891 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT37 | 5 | 119 | 0 |
SNITADHLLDGLLTAEFTYGSCRSRYEFAGYHKESSRKPSPYLIDKLRKQEALQKRCGPGTAAYEKAVRRLDSGEGVVDDGCRYLVYISYRGLGNRMLAI TSSFLYAVLTERVLL | |||
GT37 | 124 | 422 | 0 |
GSKESLGNMLQSGAVTVSADGNVSWSAPRPPPYLYLHLSGGSSYGFHDKLFFCGAHQRILGEVPWLFMWTDNYIVPGLFLTPPFTGELEAMFPEKDAVFY HLGRYLLHPTNRVWHAVTNYYHSNLAGAAQRVGVQIRVFQKKQPPQAVLDQVLSCVRGERLLPETTGGGNGTSSHAVLVTSLSSWYYERIRDEYGGRVAG GVHQPSHEGRQRWRDAAHDMWALSEMYLLSMCDVLVTSGYSTFGYVAQGLAGLRPWVMARAPMWADDWTEGLDPRDLPCRRAVSVEPCFHSPLAYGCAA |
Full Sequence |
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Protein Sequence Length: 456 Download |
RDPRSNITAD HLLDGLLTAE FTYGSCRSRY EFAGYHKESS RKPSPYLIDK LRKQEALQKR 60 CGPGTAAYEK AVRRLDSGEG VVDDGCRYLV YISYRGLGNR MLAITSSFLY AVLTERVLLG 120 YLGGSKESLG NMLQSGAVTV SADGNVSWSA PRPPPYLYLH LSGGSSYGFH DKLFFCGAHQ 180 RILGEVPWLF MWTDNYIVPG LFLTPPFTGE LEAMFPEKDA VFYHLGRYLL HPTNRVWHAV 240 TNYYHSNLAG AAQRVGVQIR VFQKKQPPQA VLDQVLSCVR GERLLPETTG GGNGTSSHAV 300 LVTSLSSWYY ERIRDEYGGR VAGGVHQPSH EGRQRWRDAA HDMWALSEMY LLSMCDVLVT 360 SGYSTFGYVA QGLAGLRPWV MARAPMWADD WTEGLDPRDL PCRRAVSVEP CFHSPLAYGC 420 AAGRDVDLDK VTPYIRRCVD VKCGIKLVNE SSNQW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd11548 | NodZ_like | 3.0e-7 | 96 | 378 | 299 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
pfam03254 | XG_FTase | 0 | 4 | 422 | 465 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
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GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC72905.1 | 0 | 5 | 455 | 107 | 601 | hypothetical protein OsI_06731 [Oryza sativa Indica Group] |
RefSeq | NP_001046540.1 | 0 | 5 | 455 | 107 | 601 | Os02g0275200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002453687.1 | 0 | 2 | 455 | 93 | 585 | hypothetical protein SORBIDRAFT_04g010420 [Sorghum bicolor] |
RefSeq | XP_002453688.1 | 0 | 6 | 455 | 78 | 566 | hypothetical protein SORBIDRAFT_04g010430 [Sorghum bicolor] |
RefSeq | XP_002453689.1 | 0 | 3 | 455 | 78 | 570 | hypothetical protein SORBIDRAFT_04g010630 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CJ894330 | 251 | 205 | 451 | 0 |
HX108473 | 205 | 187 | 388 | 0 |
CJ706781 | 276 | 154 | 414 | 0 |
CJ617853 | 217 | 240 | 452 | 0 |
CJ721833 | 211 | 244 | 450 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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