y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00026388m |
Family | GT37 |
Protein Properties | Length: 311 Molecular Weight: 34933.1 Isoelectric Point: 8.7219 |
Chromosome | Chromosome/Scaffold: 0244770 Start: 2 End: 934 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT37 | 2 | 306 | 0 |
DGDSCRSRHLLSRYYKHFPYAPSPHLLHKLRAYEARHRRCAPGTPLYARSVEQLRSGRSADEAGVECRYIVWLPIDGLGNRMLSMVSGFLYALLTGRVFL VAMPPDAADLFCEPFPGTTWLLPLEDFPVANLFGLGHNPEQSYTRLLRKKKIVVDGDDNPASNATAAAAPPVPAYVYLSLGWQMTDGPFFCGEHQRALGK VNWILLYSDLYFAPSLHTIAAFRDELRRLFPARESTSHLQLRYLLHPGNPVWGLVTRYYHSYLAPAARRIGVQIRMVGSDTVPADDKYNQILACSRQERI LPETV |
Full Sequence |
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Protein Sequence Length: 311 Download |
MDGDSCRSRH LLSRYYKHFP YAPSPHLLHK LRAYEARHRR CAPGTPLYAR SVEQLRSGRS 60 ADEAGVECRY IVWLPIDGLG NRMLSMVSGF LYALLTGRVF LVAMPPDAAD LFCEPFPGTT 120 WLLPLEDFPV ANLFGLGHNP EQSYTRLLRK KKIVVDGDDN PASNATAAAA PPVPAYVYLS 180 LGWQMTDGPF FCGEHQRALG KVNWILLYSD LYFAPSLHTI AAFRDELRRL FPARESTSHL 240 QLRYLLHPGN PVWGLVTRYY HSYLAPAARR IGVQIRMVGS DTVPADDKYN QILACSRQER 300 ILPETVDGSI * 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd11548 | NodZ_like | 8.0e-5 | 71 | 102 | 32 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
pfam03254 | XG_FTase | 1.0e-141 | 1 | 309 | 309 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
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GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ06589.1 | 0 | 1 | 304 | 113 | 415 | hypothetical protein OsI_28837 [Oryza sativa Indica Group] |
RefSeq | NP_001061574.1 | 0 | 1 | 304 | 113 | 415 | Os08g0334900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002442897.1 | 0 | 1 | 305 | 117 | 425 | hypothetical protein SORBIDRAFT_08g004580 [Sorghum bicolor] |
RefSeq | XP_002459289.1 | 0 | 1 | 305 | 94 | 394 | hypothetical protein SORBIDRAFT_02g001790 [Sorghum bicolor] |
RefSeq | XP_002461378.1 | 0 | 1 | 305 | 104 | 399 | hypothetical protein SORBIDRAFT_02g001800 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CX607786 | 221 | 1 | 217 | 0 |
FE626464 | 131 | 1 | 129 | 0 |
DR826081 | 278 | 30 | 304 | 0 |
DW056608 | 290 | 21 | 310 | 0 |
CX610762 | 152 | 1 | 148 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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