Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00026418m |
Family | GH17 |
Protein Properties | Length: 319 Molecular Weight: 33700.4 Isoelectric Point: 6.8921 |
Chromosome | Chromosome/Scaffold: 025376 Start: 5858 End: 6814 |
Description | beta-1,3-glucanase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 11 | 316 | 0 |
VGVCYGTSGDNLPPASTVVGMLRENGFTVVRLYWPDPAALAALAGTGIKVVVGAPNDVLPALAASESAAAAWVRQNIQAHPLVTFRYVVVGNEVPAGATA HLVPAMENVHAALAAAGLGHVKVTTAISQGTISVHLPPSAGEFTEEARSFMGYVVSFLERTRAPLLANLYPYFVYTLGLGHMDMSFALFTSPGTVVQDGE YGYQNLFDATVDALYTAVAKLGGSRVRVVVSETGWPTAGGAAASVENAMAYNQNLVRHVRKGTPRRPRRVEAYVFAMFNENLKEAGVEQNWGLFYPNMER VYPITF |
Full Sequence |
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Protein Sequence Length: 319 Download |
MAGFNAGAAS VGVCYGTSGD NLPPASTVVG MLRENGFTVV RLYWPDPAAL AALAGTGIKV 60 VVGAPNDVLP ALAASESAAA AWVRQNIQAH PLVTFRYVVV GNEVPAGATA HLVPAMENVH 120 AALAAAGLGH VKVTTAISQG TISVHLPPSA GEFTEEARSF MGYVVSFLER TRAPLLANLY 180 PYFVYTLGLG HMDMSFALFT SPGTVVQDGE YGYQNLFDAT VDALYTAVAK LGGSRVRVVV 240 SETGWPTAGG AAASVENAMA YNQNLVRHVR KGTPRRPRRV EAYVFAMFNE NLKEAGVEQN 300 WGLFYPNMER VYPITFGA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-7 | 233 | 307 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-117 | 11 | 316 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB85436.1 | 0 | 7 | 318 | 6 | 319 | putative glucanase [Oryza sativa Japonica Group] |
GenBank | EEE55985.1 | 0 | 7 | 318 | 51 | 364 | hypothetical protein OsJ_04727 [Oryza sativa Japonica Group] |
RefSeq | NP_001055377.1 | 0 | 8 | 316 | 26 | 334 | Os05g0375400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151398.1 | 0 | 6 | 318 | 32 | 347 | lichenase-2 [Zea mays] |
RefSeq | XP_002459076.1 | 0 | 1 | 318 | 31 | 351 | hypothetical protein SORBIDRAFT_03g045480 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 11 | 316 | 1 | 306 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1aq0_B | 0 | 11 | 316 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 11 | 316 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 11 | 316 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 11 | 316 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CB673940 | 278 | 8 | 285 | 0 |
CA240619 | 187 | 136 | 319 | 0 |
CB654106 | 257 | 60 | 316 | 0 |
CB644222 | 257 | 60 | 316 | 0 |
CB670461 | 269 | 8 | 276 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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