| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00026461m |
| Family | GT29 |
| Protein Properties | Length: 349 Molecular Weight: 37862.1 Isoelectric Point: 8.3261 |
| Chromosome | Chromosome/Scaffold: 0251443 Start: 599 End: 1689 |
| Description | Glycosyltransferase family 29 (sialyltransferase) family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT29 | 111 | 326 | 0 |
| GRRPYASCAVVGNSGVLLAREHGALIDGHDLVVRLNNAPAGEEGSWLARHVGARTGLAFLNSNVLSRCAARGGCRRCRAYGDRVPILTYMCSAAHFVEHA VCSAPAGAAAAAPVIITDPRLDALCARQVKYYSLRRFVRETGRPAAEWGTRHEEGMFHYSSGMQAVVAATGVCGRVSVFGFGKDPGARYHYHTLQRGEQE LHDYEAEYEFYRGLEA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 349 Download |
| MKRQWSHPSV ALPLLVALFL LLTFRCSLRH SQAHSRGADA PAVDATLAEL AAVDPAAAAV 60 LRDAEALIEG NLTRAPRSTR FDPGVMAELV DLIKGPIDRY AGAGRERDEE GRRPYASCAV 120 VGNSGVLLAR EHGALIDGHD LVVRLNNAPA GEEGSWLARH VGARTGLAFL NSNVLSRCAA 180 RGGCRRCRAY GDRVPILTYM CSAAHFVEHA VCSAPAGAAA AAPVIITDPR LDALCARQVK 240 YYSLRRFVRE TGRPAAEWGT RHEEGMFHYS SGMQAVVAAT GVCGRVSVFG FGKDPGARYH 300 YHTLQRGEQE LHDYEAEYEF YRGLEARPEA IPFLRDSGFK LPPVVVYR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00777 | Glyco_transf_29 | 3.0e-19 | 114 | 325 | 231 | + Glycosyltransferase family 29 (sialyltransferase). Members of this family belong to glycosyltransferase family 29. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008373 | sialyltransferase activity |
| GO:0030173 | integral to Golgi membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAH67271.1 | 0 | 2 | 348 | 3 | 384 | OSIGBa0145C12.8 [Oryza sativa (indica cultivar-group)] |
| EMBL | CAJ15149.1 | 0 | 39 | 348 | 78 | 421 | sialyltransferase-like protein [Medicago truncatula] |
| EMBL | CAN64919.1 | 0 | 1 | 347 | 1 | 388 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_001053259.1 | 0 | 2 | 348 | 3 | 384 | Os04g0506800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002446759.1 | 0 | 1 | 348 | 1 | 381 | hypothetical protein SORBIDRAFT_06g021930 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wnf_A | 0.0000001 | 118 | 302 | 100 | 258 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 2wnb_A | 0.0000001 | 118 | 302 | 100 | 258 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
| PDB | 2wml_A | 0.0000001 | 118 | 302 | 100 | 258 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
