CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00027286m
FamilyGH38
Protein PropertiesLength: 972 Molecular Weight: 111040 Isoelectric Point: 6.6408
ChromosomeChromosome/Scaffold: 024850 Start: 1817 End: 6918
Descriptiongolgi alpha-mannosidase II
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH3822511.96182e-44
  NSHYFAIIEQMMEGNMWLNDTIGVVPKNSWSIDPFGYSSTMAYLLRRMGFHNMLIQRTHYELKKELAMKKNLEYLWRQNWDIEETTDIFVHMMPFYSYDI
  PHTCGPEPAICCQFDFARMRGFSYESCPWRFDPVETDADNVQERATKLLDQYRKKSTLYRTNTLLIPLGDDFRYVSVDEAEVQFRNYEKLFDYINSNPHL
  NAEVKFGTLEDYFSTLRDEAEKINYSRPGELGSAELQGFPTLSGDFFTYA
Full Sequence
Protein Sequence     Length: 972     Download
ANSHYFAIIE QMMEGNMWLN DTIGVVPKNS WSIDPFGYSS TMAYLLRRMG FHNMLIQRTH    60
YELKKELAMK KNLEYLWRQN WDIEETTDIF VHMMPFYSYD IPHTCGPEPA ICCQFDFARM    120
RGFSYESCPW RFDPVETDAD NVQERATKLL DQYRKKSTLY RTNTLLIPLG DDFRYVSVDE    180
AEVQFRNYEK LFDYINSNPH LNAEVKFGTL EDYFSTLRDE AEKINYSRPG ELGSAELQGF    240
PTLSGDFFTY ADRNQDYWSG YYVSRPFFKA VDRVLEQTLR ASEILGSFVL GYCQKFQCAK    300
LPISFSHKLT AARRNLALFQ HHDGVTGTAK DHVVVDYGTR MHTSLQDLQL FMSRAVEVLL    360
GDFHDRSDPT LLSHFETVQE RSKYDVQPVH RVLDPHEGKA QSIVFFNPIE QTRDEIVMVV    420
VSTPDVSVLN SNGSCLQSQV SPEWQFVSDE KISTGRHRLY WRASVPALGL ETYYVVTGQD    480
CEKATPAVVK TFTASQQFPC PEPYVCSKLE GKTVEMKNSH YTLSFDVSHG LLQTVTGHKD    540
GEQTVIGEEI GMYKSRGSGA YLFKPIGEAR SIVEEGGHFI LTEGPLVQEA HSLPKTEWHK    600
PPLSHSTRIY DCGDSIQDML IEKEYHVELV GHVFNDKELI VRYKTNIDNQ RIFYSDLNGF    660
QMSRRQTYDK IPLQGNYYPM PSLAFLQDSL GNRFSVHSKQ SLGAASLKNG WLEIMLDRRL    720
VQDDGRGLGQ GLMDNRPMNV IFHLLRESNV SALPKTHSLL TLQPSLLSHR VGAHLNYPMH    780
AFMSKKPHEK SFKLPQQSFT PLTASLPCDV HIVNLKVPQP LRFPHAEAAS QRFAILLQRR    840
GWDSSYCKRG GLHCTTVGEE PVNLFYMFKD LSAVNVKATS LNLLHDDPEM LGYLEQIGDV    900
AQEGNVLISP MEIQAYKLDL QLPSSQEDIP KKNFVTTSRN RKHMTVSKLF TSSTRYIHDY    960
MSLQGTAPEG N* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00451GH38N_AMII_euk2.0e-551197198+
cd11667GH38N_Man2A23.0e-1101262262+
cd11666GH38N_Man2A13.0e-1161262262+
cd10809GH38N_AMII_GMII_SfManIII_like3.0e-1581262262+
PLN02701PLN0270101921923+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559alpha-mannosidase activity
GO:0005975carbohydrate metabolic process
GO:0006013mannose metabolic process
GO:0008270zinc ion binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAF19191.2019281041032Os06g0245700 [Oryza sativa Japonica Group]
GenBankEEC80313.1069282271150hypothetical protein OsI_22355 [Oryza sativa Indica Group]
GenBankEEE65435.1069281601083hypothetical protein OsJ_20797 [Oryza sativa Japonica Group]
RefSeqNP_001057277.1069282501173Os06g0245700 [Oryza sativa (japonica cultivar-group)]
RefSeqXP_002438145.1019282571184hypothetical protein SORBIDRAFT_10g008770 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1hxk_A019161411009A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin
PDB1hww_A019161411009A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin
PDB1hty_A019161411009A Chain A, Golgi Alpha-Mannosidase Ii
PDB3eju_A019161711039A Chain A, Golgi Alpha-Mannosidase Ii
PDB3ejt_A019161711039A Chain A, Golgi Alpha-Mannosidase Ii
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
JG9046392836469280
FL71438627012700
JG9075722856239070
CB662086281423220
JG8811532975228180
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_002_00345.1.265.483Aquca_002_00345.1.265.483Aquca_006_00230.1Aquca_006_00257.5Aquca_006_00257.9
Aquca_006_00257.8Aquca_006_00257.7Aquca_006_00257.6Aquca_006_00257.4Aquca_006_00257.3
Aquca_006_00257.2Aquca_006_00257.1Aquca_043_00016.7Aquca_043_00016.8Aquca_043_00016.6
Aquca_043_00016.5Aquca_043_00016.4Aquca_043_00016.3Aquca_043_00016.2Aquca_043_00016.1
Aquca_043_00019.2Aquca_043_00019.1Aquca_043_00018.1Aquca_056_00071.1Aquca_002_00345.1.162.261
Aquca_002_00345.1.162.261
Arabidopsis lyrata488339488225497001484445
Arabidopsis thalianaAT5G14950.1AT5G66150.1AT5G13980.3AT5G13980.2AT5G13980.1
AT3G26720.2AT3G26720.1
Brachypodium distachyonBradi1g44550.1Bradi3g21117.1Bradi4g17327.1Bradi4g17317.1
Brassica rapaBra023496Bra006275Bra037183Bra006227Bra025225
Carica papayaevm.model.supercontig_6.275evm.model.supercontig_70.70evm.model.supercontig_2646.1evm.TU.contig_36966.1evm.model.supercontig_70.69
Capsella rubellaCarubv10000075mCarubv10002909mCarubv10027738mCarubv10016625m
Citrus clementinaCiclev10014083mCiclev10017635mCiclev10024829mCiclev10024800mCiclev10030627m
Ciclev10014156mCiclev10014160mCiclev10014123m
Citrus sinensisorange1.1g002547morange1.1g002518morange1.1g002134morange1.1g001061morange1.1g015028m
orange1.1g002366morange1.1g004057morange1.1g001910morange1.1g001850morange1.1g002764m
orange1.1g002170morange1.1g002162morange1.1g002383morange1.1g001963morange1.1g001813m
orange1.1g002938morange1.1g002542morange1.1g002064morange1.1g002056morange1.1g002046m
orange1.1g002036m
Cucumis sativusCucsa.339310.1Cucsa.043720.1Cucsa.188400.2Cucsa.188400.1
Eucalyptus grandisEucgr.J02166.1Eucgr.L01536.1Eucgr.J02456.1Eucgr.K02195.1Eucgr.J02455.3
Eucgr.J02455.2Eucgr.J02455.1Eucgr.I01600.1Eucgr.G01931.1Eucgr.J02460.1
Eucgr.J02454.1Eucgr.L01537.1Eucgr.J02457.1Eucgr.J02459.2Eucgr.J02459.1
Fragaria vescamrna28330.1-v1.0-hybridmrna14585.1-v1.0-hybridmrna01394.1-v1.0-hybrid.37.348mrna01394.1-v1.0-hybrid.37.348mrna06416.1-v1.0-hybrid.39.351
mrna06416.1-v1.0-hybrid.39.351mrna14589.1-v1.0-hybrid.71.344
Glycine maxGlyma13g04761.3Glyma13g04761.2Glyma19g01890.1Glyma13g04761.1Glyma02g05240.2
Glyma02g05240.1Glyma16g23600.1Glyma01g36980.1Glyma06g17270.1Glyma04g37790.1
Glyma19g27660.2Glyma19g27660.1Glyma16g05240.2Glyma16g05240.1
Gossypium raimondiiGorai.001G258600.2Gorai.001G258600.1Gorai.006G027500.1Gorai.003G008600.2Gorai.003G008600.1
Gorai.006G000300.3Gorai.006G000300.2Gorai.006G000300.1Gorai.012G082700.6Gorai.012G082700.9
Gorai.012G082700.8Gorai.012G082700.7Gorai.012G082700.5Gorai.012G082700.4Gorai.012G082700.3
Gorai.012G082700.2Gorai.012G082700.10Gorai.012G082700.1Gorai.003G116600.2Gorai.003G116600.1
Linum usitatissimumLus10014507Lus10015337.248.571Lus10015337.248.571Lus10032179Lus10039457
Lus10012578Lus10035111Lus10012577Lus10036074Lus10025960
Lus10014259Lus10041516Lus10015337.158.248Lus10015337.158.248
Malus domesticaMDP0000888429MDP0000267909MDP0000250936MDP0000139458MDP0000274501
MDP0000274500MDP0000409920MDP0000163211MDP0000657082MDP0000211018
Manihot esculentacassava4.1_000571mcassava4.1_001602mcassava4.1_000993mcassava4.1_000971mcassava4.1_000869m
cassava4.1_001123mcassava4.1_001106m
Medicago truncatulaMedtr4g071680.1Medtr6g008850.1Medtr8g075330.1Medtr7g084040.1Medtr3g098650.2
Medtr3g098650.1Medtr7g084030.1
Mimulus guttatusmgv1a000435mmgv1a000658mmgv1a000852mmgv1a000690m
Oryza sativaLOC_Os06g13650.2LOC_Os06g13650.1LOC_Os06g13650.3LOC_Os11g32260.2LOC_Os11g32260.1
LOC_Os10g05069.2LOC_Os10g05069.1LOC_Os10g05069.3
Panicum virgatumPavirv00014532mPavirv00024149mPavirv00025946mPavirv00065120m
Physcomitrella patensPp1s10_34V6.1Pp1s77_136V6.1Pp1s129_147V6.1
Phaseolus vulgarisPhvul.004G022500.1Phvul.003G264400.1Phvul.001G084400.1Phvul.002G107300.1Phvul.001G084700.1
Phvul.009G161600.1
Picea abiesMA_10434251g0010MA_879613g0010MA_4107059g0010
Populus trichocarpaPotri.017G073900.2Potri.017G073900.1Potri.001G350400.2Potri.001G350400.1Potri.014G143600.1
Potri.014G143600.2Potri.007G056300.1Potri.002G238200.2Potri.002G238200.1Potri.012G106500.2
Potri.012G106500.1
Prunus persicappa000458mppa021513mppa000707mppa000755mppa000717m
Ricinus communis29822.m00342029868.m00034130131.m00698230131.m00698130147.m014412
Setaria italicaSi005719mSi038673mSi025964mSi034056mSi025881m
Selaginella moellendorffii104910154366266756410022178241
Sorghum bicolorSb10g008770.1Sb01g026405.1Sb05g019600.1Sb01g026390.1
Thellungiella halophilaThhalv10012487mThhalv10012612mThhalv10012546mThhalv10003575mThhalv10003577m
Vitis viniferaGSVIVT01032586001GSVIVT01018752001GSVIVT01032988001GSVIVT01008340001GSVIVT01008642001
GSVIVT01032989001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)