Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00027395m |
Family | GT31 |
Protein Properties | Length: 645 Molecular Weight: 71977.7 Isoelectric Point: 6.6083 |
Chromosome | Chromosome/Scaffold: 034827 Start: 1010 End: 4077 |
Description | galactosyltransferase1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 379 | 591 | 0 |
KRRMVIRRTWMQYDAVRQGAVAVRFFVGLHTNLMVNEELWNEARTYGDIQMLPFVDYYNLITWKTLAICIYGVNTIITKLHFSIPCFSCFSVLNCVLCDQ TSAVSAKYVMKTDDDAFVRVDEIRSTIKQLNVSNGLLYGRIDSDSSPHRNPESKWYISQEEWPEEKYPPWAHGPGYVVSQDIAREINAWYKASHLKMFKL EDVAMGIWVNDLK |
Full Sequence |
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Protein Sequence Length: 645 Download |
MWMTNKLAIT VSIAAFSLVI VRYLIAMSSS TSGISRYQIL ETNPLEWLNR PVEAKETIPG 60 AAATDASTSN SSDFRTSPEV FQWLDTWNQM KQLSSITNGL PHASEAINDG RTAWGNLTAS 120 AHNASYQHRE KERLCPYSIR RMDASKSGTD SSTIGVPCGL IVGSSITLIG TPGVLSGNFW 180 IDLVGAALPG EPEKPTVLQY NVRLNGDKIT KDPVIVQNTF TANNGWGVED RCPSTNSNNA 240 TQVDDLERCN AMVGREGRDI MNSKHHTAAK KHGESSTYFP FKQGYLAIAT LRVGLEGIHM 300 TVDGKHITSF AYRAGLEPWF VTEVKISGGF KLVSAIASGL PTSEDLENSN IEMLKSSPIP 360 AGKDVDLLIG IFSTANNFKR RMVIRRTWMQ YDAVRQGAVA VRFFVGLHTN LMVNEELWNE 420 ARTYGDIQML PFVDYYNLIT WKTLAICIYG VNTIITKLHF SIPCFSCFSV LNCVLCDQTS 480 AVSAKYVMKT DDDAFVRVDE IRSTIKQLNV SNGLLYGRID SDSSPHRNPE SKWYISQEEW 540 PEEKYPPWAH GPGYVVSQDI AREINAWYKA SHLKMFKLED VAMGIWVNDL KRDGLPVKYE 600 TDTRINIDGC NDGYIVAHYQ EPRDMLCLWE KLLRTHQAHC CNTD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00908 | Gal-bind_lectin | 1.0e-14 | 157 | 334 | 178 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
cd00070 | GLECT | 6.0e-17 | 156 | 334 | 179 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
pfam00337 | Gal-bind_lectin | 3.0e-17 | 156 | 334 | 179 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
pfam01762 | Galactosyl_T | 2.0e-41 | 379 | 591 | 219 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 0 | 16 | 641 | 648 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD34256.1 | 0 | 28 | 642 | 27 | 621 | putative beta-1,3-galactosyltransferase [Oryza sativa Japonica Group] |
DDBJ | BAF09134.2 | 0 | 28 | 642 | 56 | 650 | Os02g0577300 [Oryza sativa Japonica Group] |
GenBank | EAY86411.1 | 0 | 1 | 642 | 1 | 621 | hypothetical protein OsI_07790 [Oryza sativa Indica Group] |
RefSeq | NP_001047220.1 | 0 | 28 | 642 | 134 | 728 | Os02g0577300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002452334.1 | 0 | 1 | 643 | 1 | 596 | hypothetical protein SORBIDRAFT_04g023900 [Sorghum bicolor] |