| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00027406m |
| Family | CE10 |
| Protein Properties | Length: 186 Molecular Weight: 19549.2 Isoelectric Point: 4.8601 |
| Chromosome | Chromosome/Scaffold: 035519 Start: 6305 End: 6862 |
| Description | alpha/beta-Hydrolases superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE10 | 13 | 164 | 3.1e-31 |
| ESADFARTFLSGVSAGANLAHHLTVRVGSGQVALAPARLAGCALLSAFFGGVERTAAESDPPDGVSLTVEMADQFWRMALPAGATRDHPLANVFGPDSPD LEPVALPPVLVEAPEGDVLRDRVLLYAARLKEMGKAVELAEFKGEQHGFSVL | |||
| Full Sequence |
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| Protein Sequence Length: 186 Download |
| AALGAGADPW LAESADFART FLSGVSAGAN LAHHLTVRVG SGQVALAPAR LAGCALLSAF 60 FGGVERTAAE SDPPDGVSLT VEMADQFWRM ALPAGATRDH PLANVFGPDS PDLEPVALPP 120 VLVEAPEGDV LRDRVLLYAA RLKEMGKAVE LAEFKGEQHG FSVLRWGEAN EELIRILKHF 180 VGQTK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0657 | Aes | 4.0e-6 | 14 | 176 | 165 | + Esterase/lipase [Lipid metabolism] | ||
| pfam07859 | Abhydrolase_3 | 3.0e-26 | 10 | 161 | 158 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016787 | hydrolase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF82397.1 | 0 | 10 | 181 | 157 | 328 | unknown [Zea mays] |
| GenBank | EAY72593.1 | 0 | 1 | 183 | 140 | 325 | hypothetical protein OsI_00459 [Oryza sativa Indica Group] |
| RefSeq | NP_001148081.1 | 0 | 10 | 181 | 157 | 328 | gibberellin receptor GID1L2 [Zea mays] |
| RefSeq | XP_002455176.1 | 0 | 9 | 181 | 163 | 335 | hypothetical protein SORBIDRAFT_03g005570 [Sorghum bicolor] |
| RefSeq | XP_002455178.1 | 0 | 5 | 185 | 142 | 321 | hypothetical protein SORBIDRAFT_03g005590 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ed1_F | 6e-22 | 18 | 178 | 189 | 348 | A Chain A, Crystal Structure Of Lambda Exonuclease In Complex With A 12 Bp Symmetric Dna Duplex |
| PDB | 3ed1_E | 6e-22 | 18 | 178 | 189 | 348 | A Chain A, Crystal Structure Of Lambda Exonuclease In Complex With A 12 Bp Symmetric Dna Duplex |
| PDB | 3ed1_D | 6e-22 | 18 | 178 | 189 | 348 | A Chain A, Crystal Structure Of Lambda Exonuclease In Complex With A 12 Bp Symmetric Dna Duplex |
| PDB | 3ed1_C | 6e-22 | 18 | 178 | 189 | 348 | A Chain A, Crystal Structure Of Lambda Exonuclease In Complex With A 12 Bp Symmetric Dna Duplex |
| PDB | 3ed1_B | 6e-22 | 18 | 178 | 189 | 348 | A Chain A, Crystal Structure Of Lambda Exonuclease In Complex With A 12 Bp Symmetric Dna Duplex |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| FL750264 | 186 | 1 | 186 | 0 |
| CN139644 | 173 | 9 | 181 | 0 |
| CN142939 | 173 | 9 | 181 | 0 |
| DR825872 | 169 | 13 | 181 | 0 |
| BE366864 | 155 | 9 | 163 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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