y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00027719m |
Family | GT90 |
Protein Properties | Length: 276 Molecular Weight: 32362.8 Isoelectric Point: 6.8934 |
Chromosome | Chromosome/Scaffold: 0355706 Start: 29 End: 998 |
Description | Arabidopsis thaliana protein of unknown function (DUF821) |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT90 | 3 | 223 | 0 |
PPLFMYCKNDTALGIVFPDWTFWGWPEVNIRPWAPFLEEVEREIRRVPWLDREPYAFWKGNPDVGGLRTDLMRCNGSHNSKVDWNARLVRQDWEDADRNG FKDSNLAKQCTYRYKIYVQGRTWSVSQKYILACGSPMLRIDTPFHDFFSRGLVAGKHYLPIDSDCMCPSIKSAVDWGNAQPVQAQRMGEEGSSFARDELS MDYVYDYMLHQLTQYARLLRY |
Full Sequence |
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Protein Sequence Length: 276 Download |
MAPPLFMYCK NDTALGIVFP DWTFWGWPEV NIRPWAPFLE EVEREIRRVP WLDREPYAFW 60 KGNPDVGGLR TDLMRCNGSH NSKVDWNARL VRQDWEDADR NGFKDSNLAK QCTYRYKIYV 120 QGRTWSVSQK YILACGSPML RIDTPFHDFF SRGLVAGKHY LPIDSDCMCP SIKSAVDWGN 180 AQPVQAQRMG EEGSSFARDE LSMDYVYDYM LHQLTQYARL LRYRVTFMME SREKYVADYE 240 PCSLPPPFSL YYKAGQRVEE VGSKVKRMEQ EWKET* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05686 | Glyco_transf_90 | 2.0e-22 | 179 | 269 | 116 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
pfam05686 | Glyco_transf_90 | 3.0e-30 | 2 | 67 | 66 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
smart00672 | CAP10 | 9.0e-84 | 3 | 223 | 227 | + Putative lipopolysaccharide-modifying enzyme. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ05278.1 | 0 | 5 | 268 | 282 | 571 | hypothetical protein OsI_27481 [Oryza sativa Indica Group] |
RefSeq | NP_001060764.1 | 0 | 5 | 268 | 282 | 571 | Os08g0101800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149452.1 | 0 | 2 | 268 | 300 | 594 | LOC100283078 [Zea mays] |
RefSeq | XP_002437850.1 | 0 | 2 | 269 | 261 | 551 | hypothetical protein SORBIDRAFT_10g003730 [Sorghum bicolor] |
RefSeq | XP_002443683.1 | 0 | 2 | 268 | 295 | 588 | hypothetical protein SORBIDRAFT_07g000280 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BG262822 | 182 | 15 | 196 | 0 |
FG908067 | 225 | 3 | 227 | 0 |
EH727898 | 269 | 3 | 248 | 0 |
DY357347 | 254 | 18 | 248 | 0 |
GD115445 | 224 | 3 | 226 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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