Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00028361m |
Family | CE10 |
Protein Properties | Length: 267 Molecular Weight: 28628.5 Isoelectric Point: 4.9643 |
Chromosome | Chromosome/Scaffold: 030032 Start: 6428 End: 7269 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 8 | 255 | 0 |
GVTSKEVVIDGDTDLYIRLYLPDTASRSDVGSKKLPVLVYYHGGGFVTQSAASPVYQRFLNSLAARAGLLLVSVNYRLAPEHPLPAGYEDSLRALKWVAS GSGDPWLAGGNIVYNIAMMAAAEGEAGSVTPAAGARIEGAVLLHAGFGGREPIDGETTEWAAFSEKMWSFACPEAMDGADDPRMNPLVAAALSLRNLPCK RVLVCAGERDSLRPRDRAYYEALAASGWRAVEWFVSMGQEHVFFLFKP |
Full Sequence |
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Protein Sequence Length: 267 Download |
TSFDASTGVT SKEVVIDGDT DLYIRLYLPD TASRSDVGSK KLPVLVYYHG GGFVTQSAAS 60 PVYQRFLNSL AARAGLLLVS VNYRLAPEHP LPAGYEDSLR ALKWVASGSG DPWLAGGNIV 120 YNIAMMAAAE GEAGSVTPAA GARIEGAVLL HAGFGGREPI DGETTEWAAF SEKMWSFACP 180 EAMDGADDPR MNPLVAAALS LRNLPCKRVL VCAGERDSLR PRDRAYYEAL AASGWRAVEW 240 FVSMGQEHVF FLFKPGCNDT VVLMDR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2272 | PnbA | 2.0e-9 | 22 | 112 | 108 | + Carboxylesterase type B [Lipid metabolism] | ||
cd00312 | Esterase_lipase | 6.0e-11 | 16 | 112 | 112 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
pfam00135 | COesterase | 1.0e-12 | 22 | 112 | 104 | + Carboxylesterase family. | ||
COG0657 | Aes | 9.0e-26 | 8 | 256 | 257 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 6.0e-39 | 45 | 252 | 233 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG31893.1 | 0 | 3 | 266 | 36 | 307 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | NP_001140223.1 | 0 | 3 | 266 | 36 | 307 | hypothetical protein LOC100272258 [Zea mays] |
RefSeq | NP_001141390.1 | 0 | 3 | 266 | 35 | 316 | hypothetical protein LOC100273481 [Zea mays] |
RefSeq | NP_001148840.1 | 0 | 3 | 266 | 35 | 304 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | NP_001152234.1 | 0 | 3 | 266 | 35 | 316 | gibberellin receptor GID1L2 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 4e-28 | 5 | 158 | 49 | 208 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 2o7r_A | 4e-28 | 5 | 158 | 49 | 208 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 2zsi_A | 8e-24 | 8 | 265 | 69 | 342 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 2zsh_A | 8e-24 | 8 | 265 | 69 | 342 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 2e-23 | 8 | 234 | 61 | 312 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV516369 | 262 | 3 | 246 | 0 |
EE164195 | 247 | 3 | 233 | 0 |
EE035112 | 238 | 3 | 224 | 0 |
EB401935 | 238 | 3 | 224 | 0 |
DT947962 | 231 | 3 | 217 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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