CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00028369m
FamilyGT4
Protein PropertiesLength: 338 Molecular Weight: 37823.9 Isoelectric Point: 9.8855
ChromosomeChromosome/Scaffold: 030176 Start: 2032 End: 4911
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT41363011.2e-22
  DLLFAIINSVSRGKGQDLFLQAFYQSLQLIQQQKLKVPTMHAVVVGSDMNAQTKFETQLRDFVVKNGIHDRVHFVNKTLAVAPYLAAIDVLVQNSQARGE
  CFGRITIEAMAFKLPVLGTAAGGTTEIVLDGSTALLHPAGKEGVAPLAKNIVRLASHAEQRASMGK
Full Sequence
Protein Sequence     Length: 338     Download
MVLPARGQEA VDTARKADLV ILNTAVAGKW LDPVLKNHVP EVLPKILWWI HEMRGHYFKL    60
EYVKHLPFVA GAMIDSHTTA EYWKSRTSDR LKIQMPQTYV VHLGNSKELM EVAEDDIARR    120
VLREHIRESL GVRSEDLLFA IINSVSRGKG QDLFLQAFYQ SLQLIQQQKL KVPTMHAVVV    180
GSDMNAQTKF ETQLRDFVVK NGIHDRVHFV NKTLAVAPYL AAIDVLVQNS QARGECFGRI    240
TIEAMAFKLP VLGTAAGGTT EIVLDGSTAL LHPAGKEGVA PLAKNIVRLA SHAEQRASMG    300
KKGYDRVKEM FMEHHMAERI ASVLREVLQK SREHARS* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG0438RfaG5.0e-16135331199+
cd03795GT1_like_42.0e-18171317151+
cd03798GT1_wlbH_like1.0e-18149327183+
cd03808GT1_cap1E_like3.0e-20202320119+
cd03801GT1_YqgM_like8.0e-2514325321+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI19755.102337128463unnamed protein product [Vitis vinifera]
GenBankEAY73392.102337147482hypothetical protein OsI_01273 [Oryza sativa Indica Group]
RefSeqNP_001042653.102337147482Os01g0262600 [Oryza sativa (japonica cultivar-group)]
RefSeqNP_001130447.10233764399hypothetical protein LOC100191545 [Zea mays]
RefSeqXP_002327680.102337146481predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2jjm_L0.0000000008198332259390A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_K0.0000000008198332259390A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_J0.0000000008198332259390A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_I0.0000000008198332259390A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_H0.0000000008198332259390A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO78089633043330
HO80563932683330
HO814265299343320
EL684761283102920
EL684785283102920
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_010_00577.1Aquca_001_00590.2Aquca_001_00590.1
Arabidopsis lyrata889408316473897892474368
Arabidopsis thalianaAT1G19710.1AT1G75420.1AT3G15940.2AT3G15940.1AT1G52420.1
Brachypodium distachyonBradi2g09620.1
Brassica rapaBra025759Bra027200Bra030384
Carica papayaevm.model.supercontig_99.5evm.model.supercontig_253.2
Capsella rubellaCarubv10020237mCarubv10011399mCarubv10013095m
Citrus clementinaCiclev10025538mCiclev10001031mCiclev10024994m
Citrus sinensisorange1.1g023290morange1.1g017123morange1.1g017085morange1.1g012132morange1.1g011954m
orange1.1g004942morange1.1g004760m
Cucumis sativusCucsa.105340.1Cucsa.300870.1
Eucalyptus grandisEucgr.F01601.1Eucgr.F03009.1Eucgr.J03011.1
Fragaria vescamrna15198.1-v1.0-hybridmrna14930.1-v1.0-hybridmrna05979.1-v1.0-hybrid
Glycine maxGlyma04g03170.1Glyma06g03220.1Glyma15g01640.6Glyma15g01640.5Glyma15g01640.4
Glyma15g01640.3Glyma08g22160.2Glyma07g03870.1Glyma13g43720.1
Gossypium raimondiiGorai.009G198800.1Gorai.003G012600.2Gorai.003G012600.1Gorai.007G199800.4Gorai.007G199800.3
Gorai.007G199800.1Gorai.009G132600.4Gorai.009G132600.3Gorai.009G132600.2Gorai.009G132600.1
Gorai.002G058400.1Gorai.011G077500.1
Linum usitatissimumLus10041786Lus10028338Lus10024281Lus10011469Lus10037523
Malus domesticaMDP0000210114MDP0000312093MDP0000064350MDP0000204168
Manihot esculentacassava4.1_006962mcassava4.1_006727mcassava4.1_002537m
Medicago truncatulaMedtr4g069840.1
Mimulus guttatusmgv1a005641mmgv1a002407m
Oryza sativaLOC_Os01g15780.1
Physcomitrella patensPp1s24_249V6.3
Phaseolus vulgarisPhvul.009G060600.1Phvul.010G151400.1Phvul.005G172300.2Phvul.005G172300.1
Picea abiesMA_159042g1120
Populus trichocarpaPotri.005G118800.1Potri.002G031300.1Potri.001G179000.1Potri.001G179000.5
Prunus persicappa005334mppa005118mppa002059m
Ricinus communis30170.m01409429872.m00052635599.m00001450675.m000024
Setaria italicaSi002128m
Selaginella moellendorffii10326098243
Sorghum bicolorSb03g010200.1
Thellungiella halophilaThhalv10007567mThhalv10007509mThhalv10018489mThhalv10020188mThhalv10011288m
Thhalv10011286m
Vitis viniferaGSVIVT01009775001GSVIVT01018875001GSVIVT01017132001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)