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Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00028624m |
Family | AA1 |
Protein Properties | Length: 407 Molecular Weight: 44465.7 Isoelectric Point: 5.8719 |
Chromosome | Chromosome/Scaffold: 030124 Start: 764 End: 2309 |
Description | laccase 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 13 | 382 | 0 |
DNFFDYFPSASTINGKLGDLFNCSGVPEDGFVLDVEAGKTYLLRIINTALFSESSRSPGTNSPWLPPTPTIPYTTDLVVIAPGETIDALVVADAPPGKYY MVAMPNQAPLPDTQTPEPSTRATMQYSPAGNGGKPVAPVMPDQHDVVQSLYFHSNLSSLRDPRHPLPPVPKQVDQHLFITLGLGMACRRGLSCSSDDEND NMILVATMNNISFLKPTAALLPAHYYHVGSNKGDLLELPDKPPRVFNFTDPSLIPIGPKEKALEQTYMATLARWFRASTSIMQGDSNPMHLHGHDMFVLA QGHGNFDAARDRARYNLVDPPLKNTVVVPNLGWVAIRFVADNPGVWYMHCHYEFHLAMGMTAVFIVEDGP |
Full Sequence |
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Protein Sequence Length: 407 Download |
MDLAVVARRM EKDNFFDYFP SASTINGKLG DLFNCSGVPE DGFVLDVEAG KTYLLRIINT 60 ALFSESSRSP GTNSPWLPPT PTIPYTTDLV VIAPGETIDA LVVADAPPGK YYMVAMPNQA 120 PLPDTQTPEP STRATMQYSP AGNGGKPVAP VMPDQHDVVQ SLYFHSNLSS LRDPRHPLPP 180 VPKQVDQHLF ITLGLGMACR RGLSCSSDDE NDNMILVATM NNISFLKPTA ALLPAHYYHV 240 GSNKGDLLEL PDKPPRVFNF TDPSLIPIGP KEKALEQTYM ATLARWFRAS TSIMQGDSNP 300 MHLHGHDMFV LAQGHGNFDA ARDRARYNLV DPPLKNTVVV PNLGWVAIRF VADNPGVWYM 360 HCHYEFHLAM GMTAVFIVED GPTVNTSLPA PTASGLSIMW PPQQQG* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02191 | PLN02191 | 2.0e-30 | 44 | 377 | 344 | + L-ascorbate oxidase | ||
pfam07731 | Cu-oxidase_2 | 8.0e-31 | 300 | 382 | 83 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
TIGR03388 | ascorbase | 3.0e-36 | 43 | 376 | 362 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 2.0e-96 | 22 | 391 | 385 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE50804.1 | 0 | 36 | 391 | 386 | 762 | hypothetical protein OsJ_31178 [Oryza sativa Japonica Group] |
RefSeq | NP_001064399.1 | 0 | 2 | 391 | 186 | 595 | Os10g0346300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146681.1 | 0 | 2 | 381 | 186 | 585 | hypothetical protein LOC100280281 [Zea mays] |
RefSeq | XP_002449982.1 | 0 | 2 | 381 | 178 | 581 | hypothetical protein SORBIDRAFT_05g026630 [Sorghum bicolor] |
RefSeq | XP_002457562.1 | 0 | 2 | 391 | 175 | 586 | hypothetical protein SORBIDRAFT_03g009410 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 2e-27 | 43 | 376 | 204 | 521 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1asq_A | 2e-27 | 43 | 376 | 204 | 521 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1asp_B | 2e-27 | 43 | 376 | 204 | 521 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1asp_A | 2e-27 | 43 | 376 | 204 | 521 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 1aso_B | 2e-27 | 43 | 376 | 204 | 521 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK593019 | 253 | 144 | 385 | 0 |
CA146254 | 236 | 147 | 368 | 0 |
EG387833 | 284 | 102 | 372 | 0 |
HO303963 | 188 | 215 | 391 | 0 |
JK601686 | 186 | 217 | 391 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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