Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00028712m |
Family | GT34 |
Protein Properties | Length: 271 Molecular Weight: 30689.6 Isoelectric Point: 5.6798 |
Chromosome | Chromosome/Scaffold: 029812 Start: 57 End: 869 |
Description | xylosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT34 | 2 | 198 | 0 |
AVLDAELSGFWTKLPILRALMLAHPETELLWWADSDAVFTDMLFEPPWDRYAAHNLVVPGWDDKVYVARSWLGINAGSFIIRNCQWSLDLLDAWARMGPR GPVRYEYGKVLGEALSDRPSYEADDQSALVYLLVTQRGRWGGRTFLEGSYSLHGYWVDIVDRYEEMRRRSRTPGVGGGGERWPLVTHFVGCKPCGGQ |
Full Sequence |
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Protein Sequence Length: 271 Download |
NAVLDAELSG FWTKLPILRA LMLAHPETEL LWWADSDAVF TDMLFEPPWD RYAAHNLVVP 60 GWDDKVYVAR SWLGINAGSF IIRNCQWSLD LLDAWARMGP RGPVRYEYGK VLGEALSDRP 120 SYEADDQSAL VYLLVTQRGR WGGRTFLEGS YSLHGYWVDI VDRYEEMRRR SRTPGVGGGG 180 ERWPLVTHFV GCKPCGGQYA SYDAARCRRG MERALNFADD QILRLYGFEH ESLNTTAVRR 240 VRDETGGPLD AEDEEIGRLL HPTFRAGNRG * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05637 | Glyco_transf_34 | 4.0e-46 | 1 | 197 | 218 | + galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34. | ||
PLN03181 | PLN03181 | 5.0e-101 | 1 | 239 | 272 | + glycosyltransferase; Provisional | ||
PLN03182 | PLN03182 | 5.0e-168 | 2 | 264 | 263 | + xyloglucan 6-xylosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0016021 | integral to membrane |
GO:0016758 | transferase activity, transferring hexosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY89696.1 | 0 | 1 | 267 | 185 | 445 | hypothetical protein OsI_11232 [Oryza sativa Indica Group] |
RefSeq | NP_001049886.1 | 0 | 1 | 269 | 208 | 474 | Os03g0305800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002455150.1 | 0 | 2 | 267 | 184 | 450 | hypothetical protein SORBIDRAFT_03g005110 [Sorghum bicolor] |
RefSeq | XP_002465378.1 | 0 | 1 | 267 | 177 | 443 | hypothetical protein SORBIDRAFT_01g037530 [Sorghum bicolor] |
RefSeq | XP_002465379.1 | 0 | 1 | 268 | 177 | 445 | hypothetical protein SORBIDRAFT_01g037540 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xyloglucan biosynthesis | RXN-12415 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
xyloglucan biosynthesis | RXN-9461 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX312985 | 265 | 2 | 266 | 0 |
CO481478 | 265 | 2 | 266 | 0 |
GT268978 | 253 | 2 | 254 | 0 |
EX660060 | 265 | 2 | 266 | 0 |
EX040149 | 264 | 2 | 265 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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