y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00028910m |
Family | CE10 |
Protein Properties | Length: 335 Molecular Weight: 36025.9 Isoelectric Point: 5.8337 |
Chromosome | Chromosome/Scaffold: 007133 Start: 9589 End: 10622 |
Description | carboxyesterase 18 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE10 | 53 | 331 | 0 |
SLADRQARASARPDKFGVRSADVDVDASRGLWALVFSPSEAALPLPVVVYFHGGGFALLSAASAPYDAMCRRLCRELGAVVHRYPAAYDDGVDVLRHLGG SPVAGGVPVDLSRCFLAGDSAGGNIIHHVAQRWTAASGSGSSEPVRIAGLVLLQPYFGGEERTAAEQRLEGVAPVVNARRSDWSWWAFLPEGADRNHPAA HVTGEAGPEAELAEAFPPAMVVVGGLDPLQDWQRRYAAMLRRRGMAVWVVEFPEAIHTFYVFPELADAGKVVKEMKAFM |
Full Sequence |
---|
Protein Sequence Length: 335 Download |
MEMEGSTREQ ETAAAAPRPP ALPWTVRLQI FGLVAATDIA QRADGTVNRF VFSLADRQAR 60 ASARPDKFGV RSADVDVDAS RGLWALVFSP SEAALPLPVV VYFHGGGFAL LSAASAPYDA 120 MCRRLCRELG AVVHRYPAAY DDGVDVLRHL GGSPVAGGVP VDLSRCFLAG DSAGGNIIHH 180 VAQRWTAASG SGSSEPVRIA GLVLLQPYFG GEERTAAEQR LEGVAPVVNA RRSDWSWWAF 240 LPEGADRNHP AAHVTGEAGP EAELAEAFPP AMVVVGGLDP LQDWQRRYAA MLRRRGMAVW 300 VVEFPEAIHT FYVFPELADA GKVVKEMKAF MDEH* 360 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00135 | COesterase | 0.007 | 87 | 119 | 35 | + Carboxylesterase family. | ||
COG2272 | PnbA | 0.006 | 55 | 133 | 80 | + Carboxylesterase type B [Lipid metabolism] | ||
PRK10162 | PRK10162 | 3.0e-7 | 89 | 311 | 235 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 7.0e-23 | 24 | 315 | 303 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 1.0e-45 | 100 | 312 | 225 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ04888.1 | 0 | 5 | 334 | 2 | 348 | hypothetical protein OsI_27070 [Oryza sativa Indica Group] |
RefSeq | NP_001057470.1 | 0 | 21 | 333 | 12 | 351 | Os06g0306600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001060441.1 | 0 | 5 | 334 | 2 | 348 | Os07g0643400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151174.1 | 0 | 11 | 334 | 7 | 339 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | XP_002463276.1 | 0 | 16 | 333 | 26 | 359 | hypothetical protein SORBIDRAFT_02g041040 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 0 | 22 | 332 | 23 | 349 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 2zsh_A | 0 | 22 | 332 | 23 | 349 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 0 | 22 | 332 | 15 | 348 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 0 | 22 | 332 | 15 | 348 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 0 | 22 | 332 | 15 | 348 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EG375636 | 253 | 3 | 236 | 0 |
FL786428 | 248 | 24 | 254 | 0 |
DV857045 | 204 | 134 | 334 | 0 |
FL865493 | 241 | 7 | 231 | 0 |
CK206971 | 283 | 24 | 286 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|