Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00028930m |
Family | GT17 |
Protein Properties | Length: 365 Molecular Weight: 42236.1 Isoelectric Point: 8.7216 |
Chromosome | Chromosome/Scaffold: 007391 Start: 12075 End: 13169 |
Description | beta-1,4-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT17 | 68 | 357 | 0 |
ISMPQLCQLHGWGILPSPRRVFDAVLFSNELDILEIRYRELLPYVDRFVILEANATFTGIPKSLSFYENIGRFAFAGSKIVYDMLSIGELDTDHLRQPFN VEAYHRRSLNMLIRRSGIAAGDALIMADADEIPSPETLQLLKWCDGIPPVMHLEMKNYMYSFEFPVDDNSWRASAHVFNERTLYRHSRQSNLILADSGWH CSFCFRDIKEFIFKMKAYSHADRVKQQSFLNPERIQKIICNGEDLFDMLPEEYTFRDLFKKMGPIPKSASAVHLPSYLIKNADKFRFLLP |
Full Sequence |
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Protein Sequence Length: 365 Download |
MARDLPHPPV TRRKILPFKF LIPFVLILSV SVIAVTQYFQ SISYLLRPLW DTPPTPFTRI 60 PHYYAPNISM PQLCQLHGWG ILPSPRRVFD AVLFSNELDI LEIRYRELLP YVDRFVILEA 120 NATFTGIPKS LSFYENIGRF AFAGSKIVYD MLSIGELDTD HLRQPFNVEA YHRRSLNMLI 180 RRSGIAAGDA LIMADADEIP SPETLQLLKW CDGIPPVMHL EMKNYMYSFE FPVDDNSWRA 240 SAHVFNERTL YRHSRQSNLI LADSGWHCSF CFRDIKEFIF KMKAYSHADR VKQQSFLNPE 300 RIQKIICNGE DLFDMLPEEY TFRDLFKKMG PIPKSASAVH LPSYLIKNAD KFRFLLPGGC 360 LRSK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam04724 | Glyco_transf_17 | 0 | 8 | 364 | 363 | + Glycosyltransferase family 17. This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC:2.4.1.144). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression. |
Gene Ontology | |
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GO Term | Description |
GO:0003830 | beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity |
GO:0006487 | protein N-linked glycosylation |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACR35217.1 | 0 | 1 | 364 | 1 | 364 | unknown [Zea mays] |
GenBank | EEC69663.1 | 0 | 1 | 362 | 1 | 362 | hypothetical protein OsI_39089 [Oryza sativa Indica Group] |
RefSeq | NP_001067255.1 | 0 | 1 | 362 | 1 | 362 | Os12g0611900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002324640.1 | 0 | 40 | 363 | 38 | 361 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002442514.1 | 0 | 1 | 364 | 1 | 364 | hypothetical protein SORBIDRAFT_08g021190 [Sorghum bicolor] |