Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00029143m |
Family | GH9 |
Protein Properties | Length: 622 Molecular Weight: 69066.7 Isoelectric Point: 9.2639 |
Chromosome | Chromosome/Scaffold: 005886 Start: 12061 End: 15552 |
Description | glycosyl hydrolase 9A1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 109 | 583 | 0 |
QYTQALHKALMFFNAQRSGPLPKHNGVSWRGNSCMKDGLSDSTVRRSLVGGFYDAGDAIKFNYPMAWSMTMLSWSVIEYKAKYEAIGELDHIKELIKWGT DYILKTFNSSADTIDRIVAQVGVGDTSKGSSQPNDHYCWMRPEDIDYKRPVTECHSCSDLASEMAAALAAASIVFKDSKTYSDKLVKGAKALYKFGRLTR GRYSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNSYLTIATAPGMAKHAGAYWFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHN QTDNVMCSYLPLFNSFNFTKGGLIQLNHGGPQPLQYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKTSYVVGFGNKY PKRPHHRGASIPHNGVKYGCKGGFKWRETKKANPNILVGAMVAGPDRHDGFKDVRTNYNYTEPTLAANAGLVAAL |
Full Sequence |
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Protein Sequence Length: 622 Download |
MFGRDPWGGS LEISNADSAT DDDRSRDLDR AALMRQLDET QQSWLLAGPG DQAGKKKKKY 60 VDLGCVVLDR KIFMWTVGTI LGLGVFIGFV MMIVKLVPHK RPPPPPPDQY TQALHKALMF 120 FNAQRSGPLP KHNGVSWRGN SCMKDGLSDS TVRRSLVGGF YDAGDAIKFN YPMAWSMTML 180 SWSVIEYKAK YEAIGELDHI KELIKWGTDY ILKTFNSSAD TIDRIVAQVG VGDTSKGSSQ 240 PNDHYCWMRP EDIDYKRPVT ECHSCSDLAS EMAAALAAAS IVFKDSKTYS DKLVKGAKAL 300 YKFGRLTRGR YSPNGSDQAI FYNSTSYWDE FVWGGAWMYF ATGNNSYLTI ATAPGMAKHA 360 GAYWFGSPNY GVFTWDDKLP GAQVLLSRLR LFLSPGYPYE EILRTFHNQT DNVMCSYLPL 420 FNSFNFTKGG LIQLNHGGPQ PLQYAVNAAF LASLYSDYLE AADTPGWYCG PNFYTTEVLR 480 KFARSQLDYI LGKNPLKTSY VVGFGNKYPK RPHHRGASIP HNGVKYGCKG GFKWRETKKA 540 NPNILVGAMV AGPDRHDGFK DVRTNYNYTE PTLAANAGLV AALISIADIP TGRYSIDKNT 600 IFSAIPPMFP TPPPPPSAWK P* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02340 | PLN02340 | 8.0e-110 | 110 | 600 | 508 | + endoglucanase | ||
PLN02613 | PLN02613 | 5.0e-110 | 74 | 584 | 525 | + endoglucanase | ||
PLN02266 | PLN02266 | 1.0e-111 | 99 | 587 | 501 | + endoglucanase | ||
PLN02345 | PLN02345 | 3.0e-143 | 113 | 590 | 489 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 3.0e-163 | 110 | 583 | 480 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28577.1 | 0 | 1 | 621 | 1 | 621 | unknown [Zea mays] |
EMBL | CBB36505.1 | 0 | 1 | 621 | 1 | 626 | Hordeum vulgare protein similar to endo-1,4-b-glucanase BAA94257 [Saccharum hybrid cultivar R570] |
RefSeq | NP_001051192.1 | 0 | 1 | 621 | 1 | 620 | Os03g0736300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151770.1 | 0 | 1 | 621 | 1 | 621 | endo-1,4-beta-glucanase Cel1 [Zea mays] |
RefSeq | XP_002463915.1 | 0 | 1 | 621 | 1 | 621 | hypothetical protein SORBIDRAFT_01g008860 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 110 | 586 | 5 | 428 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1ksc_A | 0 | 110 | 586 | 5 | 428 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 1ks8_A | 0 | 110 | 586 | 5 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 106 | 588 | 2 | 442 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 106 | 588 | 2 | 442 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |