| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00029144m |
| Family | GH9 |
| Protein Properties | Length: 480 Molecular Weight: 53276.4 Isoelectric Point: 8.9985 |
| Chromosome | Chromosome/Scaffold: 005886 Start: 12061 End: 14582 |
| Description | glycosyl hydrolase 9A1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH9 | 9 | 441 | 0 |
| TVRRSLVGGFYDAGDAIKFNYPMAWSMTMLSWSVIEYKAKYEAIGELDHIKELIKWGTDYILKTFNSSADTIDRIVAQVGVGDTSKGSSQPNDHYCWMRP EDIDYKRPVTECHSCSDLASEMAAALAAASIVFKDSKTYSDKLVKGAKALYKFGRLTRGRYSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNSYLTI ATAPGMAKHAGAYWFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPLFNSFNFTKGGLIQLNHGGPQPLQYAVNAAF LASLYSDYLEAADTPGWYCGPNFYTTEVLRKFARSQLDYILGKNPLKTSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGFKWRETKKANPNILVGAMV AGPDRHDGFKDVRTNYNYTEPTLAANAGLVAAL | |||
| Full Sequence |
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| Protein Sequence Length: 480 Download |
| MKDGLSDSTV RRSLVGGFYD AGDAIKFNYP MAWSMTMLSW SVIEYKAKYE AIGELDHIKE 60 LIKWGTDYIL KTFNSSADTI DRIVAQVGVG DTSKGSSQPN DHYCWMRPED IDYKRPVTEC 120 HSCSDLASEM AAALAAASIV FKDSKTYSDK LVKGAKALYK FGRLTRGRYS PNGSDQAIFY 180 NSTSYWDEFV WGGAWMYFAT GNNSYLTIAT APGMAKHAGA YWFGSPNYGV FTWDDKLPGA 240 QVLLSRLRLF LSPGYPYEEI LRTFHNQTDN VMCSYLPLFN SFNFTKGGLI QLNHGGPQPL 300 QYAVNAAFLA SLYSDYLEAA DTPGWYCGPN FYTTEVLRKF ARSQLDYILG KNPLKTSYVV 360 GFGNKYPKRP HHRGASIPHN GVKYGCKGGF KWRETKKANP NILVGAMVAG PDRHDGFKDV 420 RTNYNYTEPT LAANAGLVAA LISIADIPTG RYSIDKNTIF SAIPPMFPTP PPPPSAWKP* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 8.0e-95 | 1 | 458 | 475 | + endoglucanase | ||
| PLN02613 | PLN02613 | 8.0e-95 | 4 | 442 | 454 | + endoglucanase | ||
| PLN02266 | PLN02266 | 8.0e-99 | 4 | 445 | 455 | + endoglucanase | ||
| PLN02345 | PLN02345 | 8.0e-132 | 4 | 448 | 457 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 2.0e-142 | 14 | 441 | 434 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM13693.1 | 0 | 1 | 479 | 144 | 620 | endo-1,4-beta-glucanase [Triticum aestivum] |
| GenBank | ACN28577.1 | 0 | 1 | 479 | 143 | 621 | unknown [Zea mays] |
| EMBL | CBB36505.1 | 0 | 1 | 479 | 148 | 626 | Hordeum vulgare protein similar to endo-1,4-b-glucanase BAA94257 [Saccharum hybrid cultivar R570] |
| RefSeq | NP_001151770.1 | 0 | 1 | 479 | 143 | 621 | endo-1,4-beta-glucanase Cel1 [Zea mays] |
| RefSeq | XP_002463915.1 | 0 | 1 | 479 | 143 | 621 | hypothetical protein SORBIDRAFT_01g008860 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 12 | 444 | 46 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ksc_A | 0 | 12 | 444 | 46 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ks8_A | 0 | 12 | 444 | 46 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 14 | 444 | 70 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4doe_A | 0 | 1 | 450 | 61 | 465 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794674 | 466 | 1 | 463 | 0 |
| BF010444 | 466 | 1 | 463 | 0 |
| HO796213 | 457 | 8 | 463 | 0 |
| HS353245 | 323 | 141 | 463 | 0 |
| GO837634 | 325 | 139 | 462 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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