Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00029174m |
Family | GH3 |
Protein Properties | Length: 487 Molecular Weight: 53116.3 Isoelectric Point: 9.8613 |
Chromosome | Chromosome/Scaffold: 007380 Start: 14 End: 1666 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 112 | 347 | 0 |
LKTRLGIPILYGIDAVHGNNNVYNATIFPHNVGLGATRDPNLVKRIGDATAHEARATGIPYTFAPCVAVCRDPRWGRCYESYSEDTRLVQLMTSSMVTGL QGDVPSKHPKGVPFVGGAKKVAGCAKHFVGDGGTQRGVNENNTVLSFHDLMRIHMPPYDNAVIKGISTVMISYSSFNGVKMHENKFLITDTLKNKMNFRG FVITDWQAVDRITNPPHKHYYHSIEETIHAGIDMVM |
Full Sequence |
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Protein Sequence Length: 487 Download |
MARSPAAAAV ACLLVAAVLL PAAAAEKAKA EYVKYKDPKQ PINERVDDLL SRMTLEEKIG 60 QMSQIERANA TTEVIEKYFV GSVLSGGGSV PSEKATASVW QKMVTAMQKA ALKTRLGIPI 120 LYGIDAVHGN NNVYNATIFP HNVGLGATRD PNLVKRIGDA TAHEARATGI PYTFAPCVAV 180 CRDPRWGRCY ESYSEDTRLV QLMTSSMVTG LQGDVPSKHP KGVPFVGGAK KVAGCAKHFV 240 GDGGTQRGVN ENNTVLSFHD LMRIHMPPYD NAVIKGISTV MISYSSFNGV KMHENKFLIT 300 DTLKNKMNFR GFVITDWQAV DRITNPPHKH YYHSIEETIH AGIDMVMIPY DYPEFVADVV 360 KQVKAGQIKL DRVNDAVSRI LRVKFTMGLF EDPLPDPRLA KELGSKEHRA IAREAVRKSL 420 VLLKNSKKGQ KEGMLPLSKN AKKVLVAGSH AHDLGNQCGG WTIKWQGESG NSLTGAGATI 480 LEAIKKA |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-10 | 420 | 487 | 68 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PLN03080 | PLN03080 | 2.0e-33 | 41 | 462 | 459 | + Probable beta-xylosidase; Provisional | ||
PRK15098 | PRK15098 | 1.0e-65 | 38 | 446 | 427 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 9.0e-87 | 54 | 383 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 2.0e-91 | 53 | 487 | 446 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY91867.1 | 0 | 28 | 487 | 26 | 483 | hypothetical protein OsI_13514 [Oryza sativa Indica Group] |
RefSeq | NP_001051274.1 | 0 | 28 | 487 | 33 | 490 | Os03g0749100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001051275.1 | 0 | 16 | 485 | 8 | 473 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001105671.1 | 0 | 30 | 487 | 22 | 479 | beta-glucanase [Zea mays] |
RefSeq | XP_002466456.1 | 0 | 1 | 487 | 1 | 483 | hypothetical protein SORBIDRAFT_01g008050 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 31 | 487 | 1 | 454 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1x38_A | 0 | 31 | 487 | 1 | 454 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1lq2_A | 0 | 31 | 487 | 1 | 454 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 31 | 487 | 1 | 454 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 31 | 487 | 1 | 454 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |