| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00029375m |
| Family | CBM49 |
| Protein Properties | Length: 623 Molecular Weight: 67760.9 Isoelectric Point: 5.5787 |
| Chromosome | Chromosome/Scaffold: 007888 Start: 10527 End: 12947 |
| Description | glycosyl hydrolase 9C1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM49 | 528 | 607 | 1.8e-27 |
| LEFVHTVSNSWTTNGVEYYRHVVTGKNTCGHPITYLKLHIKGLFGPIYGVSAAKEKDAYEFPPWLARLGAGEQFAIVYIQ | |||
| GH9 | 30 | 493 | 0 |
| DYAGAFDKCLQFFEAQRSGKLPADRRVKWRGDSALTDGFSQGVDLVGGYYDSGDHVKFGFPMAYAVTMLSWGVLEFDKEMVAANNLQRALDAIRWGTNYF IKAHTEPNGLWVQVGDGDSDHLCWERAEDMSTPRTAFKIDINHPGSDVAGETAAALAAAAKAFRPYDSMYADLLLLHAKKLFTFADTFRGRYDDSLQSAK KFYPSESGYQDELLWAAAWLYEATGDEDYLRYVSQNAEAFGGTGWSVLEFSWDNKYAGLQVLLSKVLFEGRGAGDYADTLRQFQAKAEFFLCACLQKNNG HNIKLTPGGLLYVDDWNNMQYVSSSTFVLTVYADYLAVSRGALKCPDGEVKPAEIVRFAKSQVDYVLGNNPRGMSYMVGYGSYFPTHVHHRGASIPSVSD DKSTVGCMDGFDKYYNSKGADPNVLHGAIVGGPDANDGFVDDRCNYQHAEPTIAGNAPICGVFA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 623 Download |
| MARLMTTGTL VMAAAALLLL AAAADASSYD YAGAFDKCLQ FFEAQRSGKL PADRRVKWRG 60 DSALTDGFSQ GVDLVGGYYD SGDHVKFGFP MAYAVTMLSW GVLEFDKEMV AANNLQRALD 120 AIRWGTNYFI KAHTEPNGLW VQVGDGDSDH LCWERAEDMS TPRTAFKIDI NHPGSDVAGE 180 TAAALAAAAK AFRPYDSMYA DLLLLHAKKL FTFADTFRGR YDDSLQSAKK FYPSESGYQD 240 ELLWAAAWLY EATGDEDYLR YVSQNAEAFG GTGWSVLEFS WDNKYAGLQV LLSKVLFEGR 300 GAGDYADTLR QFQAKAEFFL CACLQKNNGH NIKLTPGGLL YVDDWNNMQY VSSSTFVLTV 360 YADYLAVSRG ALKCPDGEVK PAEIVRFAKS QVDYVLGNNP RGMSYMVGYG SYFPTHVHHR 420 GASIPSVSDD KSTVGCMDGF DKYYNSKGAD PNVLHGAIVG GPDANDGFVD DRCNYQHAEP 480 TIAGNAPICG VFARLASEPA DAASGDNSPA PSYSPPHDSS PSSKGSPLEF VHTVSNSWTT 540 NGVEYYRHVV TGKNTCGHPI TYLKLHIKGL FGPIYGVSAA KEKDAYEFPP WLARLGAGEQ 600 FAIVYIQGGP AAKISVVNYK TA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 0 | 33 | 620 | 590 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 34 | 622 | 600 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 34 | 495 | 463 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 34 | 496 | 463 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 34 | 493 | 462 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| Swiss-Prot | A2XYW8 | 0 | 25 | 622 | 33 | 625 | GUN13_ORYSI RecName: Full=Endoglucanase 13; AltName: Full=Endo-1,4-beta glucanase 13; AltName: Full=OsGLU6; Flags: Precursor |
| EMBL | CBG76271.1 | 0 | 25 | 622 | 28 | 620 | OO_Ba0005L10-OO_Ba0081K17.22 [Oryza officinalis] |
| GenBank | EAY96028.1 | 0 | 25 | 622 | 33 | 625 | hypothetical protein OsI_17901 [Oryza sativa Indica Group] |
| RefSeq | NP_001054243.1 | 0 | 25 | 622 | 33 | 625 | Os04g0674800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002448763.1 | 0 | 1 | 622 | 1 | 630 | hypothetical protein SORBIDRAFT_06g032760 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 28 | 497 | 2 | 430 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1ksc_A | 0 | 28 | 497 | 2 | 430 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1ks8_A | 0 | 28 | 497 | 2 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 28 | 498 | 3 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 28 | 498 | 3 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
