| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00029470m |
| Family | AA1 |
| Protein Properties | Length: 595 Molecular Weight: 64127 Isoelectric Point: 7.9192 |
| Chromosome | Chromosome/Scaffold: 006650 Start: 9295 End: 11772 |
| Description | laccase 14 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 39 | 580 | 0 |
| RVHHYQFLIEKVDVTKLCRQRSILTVNGQFPGPTIRARRGDVVVVNVRNHGDKNITIHWHGVDQPRNPWSDGPEYITQCPIQPGAAFAYRVILSQEEGTL WWHAHTGFDRATVHGAIVVLPKHGTAFPFVQSATAMEEMPPIILGEWWRNDDANQLLEDAVRTGRDVKPSDATTINGEPGDLFPCSKPGTVRVRVERGKT YLLRVINAGLTNDMFFAVAGHRLTVVATDARYAKPFPVDHLMVASGQTVDALLHAAGDGGRYYMAARAFASNTNVDFNNSTATSIVEYADAPPAARQGRP PVFPATLPAVDDAAAAEAYTARLRSLASEAHPIDVPARADERLLVTMAVNLLPCVAQNATCTGPRGGRLAASLNNVSFQNPPAADILGAYYRGRSGVYDA DFPNGPPSLFNFTDPGIPAAGLVGPFTERGTRVKVLEHGAAVEVVFQDTAVLGTESHPMHLHGFSFYVVGRGLGNFDEARDPAGYNLVDPPRQNTVAVPK GGWAAIRFRATNPGVWFMHCHFDRHVVWGMDTVFIVKDGKAP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 595 Download |
| MGAVAATAPA VLLLRFLQLG VFLALGVAAA LGPAAQGSRV HHYQFLIEKV DVTKLCRQRS 60 ILTVNGQFPG PTIRARRGDV VVVNVRNHGD KNITIHWHGV DQPRNPWSDG PEYITQCPIQ 120 PGAAFAYRVI LSQEEGTLWW HAHTGFDRAT VHGAIVVLPK HGTAFPFVQS ATAMEEMPPI 180 ILGEWWRNDD ANQLLEDAVR TGRDVKPSDA TTINGEPGDL FPCSKPGTVR VRVERGKTYL 240 LRVINAGLTN DMFFAVAGHR LTVVATDARY AKPFPVDHLM VASGQTVDAL LHAAGDGGRY 300 YMAARAFASN TNVDFNNSTA TSIVEYADAP PAARQGRPPV FPATLPAVDD AAAAEAYTAR 360 LRSLASEAHP IDVPARADER LLVTMAVNLL PCVAQNATCT GPRGGRLAAS LNNVSFQNPP 420 AADILGAYYR GRSGVYDADF PNGPPSLFNF TDPGIPAAGL VGPFTERGTR VKVLEHGAAV 480 EVVFQDTAVL GTESHPMHLH GFSFYVVGRG LGNFDEARDP AGYNLVDPPR QNTVAVPKGG 540 WAAIRFRATN PGVWFMHCHF DRHVVWGMDT VFIVKDGKAP QAKMMQPPPN MPKC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 1.0e-44 | 51 | 576 | 560 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| PLN02191 | PLN02191 | 1.0e-62 | 56 | 580 | 556 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 7.0e-73 | 38 | 584 | 580 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 8.0e-79 | 40 | 584 | 574 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 39 | 594 | 556 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001068513.1 | 0 | 37 | 594 | 30 | 583 | Os11g0696900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105915.1 | 0 | 39 | 594 | 36 | 584 | putative laccase [Zea mays] |
| Swiss-Prot | Q6Z8L2 | 0 | 36 | 594 | 26 | 579 | LAC9_ORYSJ RecName: Full=Putative laccase-9; AltName: Full=Benzenediol:oxygen oxidoreductase 9; AltName: Full=Urishiol oxidase 9; AltName: Full=Diphenol oxidase 9; Flags: Precursor |
| RefSeq | XP_002439036.1 | 0 | 1 | 594 | 1 | 605 | hypothetical protein SORBIDRAFT_10g030340 [Sorghum bicolor] |
| RefSeq | XP_002452548.1 | 0 | 38 | 594 | 43 | 590 | hypothetical protein SORBIDRAFT_04g027860 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 38 | 584 | 1 | 536 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1asq_A | 0 | 38 | 584 | 1 | 536 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1asp_B | 0 | 38 | 584 | 1 | 536 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1asp_A | 0 | 38 | 584 | 1 | 536 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 1aso_B | 0 | 38 | 584 | 1 | 536 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
