| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00029945m |
| Family | GH17 |
| Protein Properties | Length: 348 Molecular Weight: 36821.3 Isoelectric Point: 4.6014 |
| Chromosome | Chromosome/Scaffold: 006174 Start: 12205 End: 13350 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 29 | 333 | 0 |
| IGVCYGMNGDDLPSASDVVQLYKDNGIDSMRIYSPDTDVLQALSGSDIAVTVGVPNADVGAIASHPSAAAAWTYVLAFPAVQFRYIAVGNEVVGAGTESV LPAMRNLDRALSAAGLADDIKVSTAVTLDVVGTSFPPSAGSFLEEGYMTHVAQYLQSTGAPLLANVYPYYSYVSNPGQIDINYALFNWRSSNVLDGNNTY LNLFDAMVDCFYSALENAGAGNVTVVVSESGWPSAGSKAANASNSRTYSQNLINHVAQGTPKRPGVIEAYIYATFNEDHKLADDETRRHFGLFNKDRSLA YPIDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 348 Download |
| MAKQAVVPVV ALALLLGALA TIPAGVRSIG VCYGMNGDDL PSASDVVQLY KDNGIDSMRI 60 YSPDTDVLQA LSGSDIAVTV GVPNADVGAI ASHPSAAAAW TYVLAFPAVQ FRYIAVGNEV 120 VGAGTESVLP AMRNLDRALS AAGLADDIKV STAVTLDVVG TSFPPSAGSF LEEGYMTHVA 180 QYLQSTGAPL LANVYPYYSY VSNPGQIDIN YALFNWRSSN VLDGNNTYLN LFDAMVDCFY 240 SALENAGAGN VTVVVSESGW PSAGSKAANA SNSRTYSQNL INHVAQGTPK RPGVIEAYIY 300 ATFNEDHKLA DDETRRHFGL FNKDRSLAYP IDFVSPKQDR SRPFGVP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-121 | 29 | 333 | 312 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABB04443.1 | 0 | 1 | 333 | 1 | 333 | pathogenesis-related protein 6 [Zea mays subsp. parviglumis] |
| GenBank | ABB04452.1 | 0 | 1 | 333 | 1 | 333 | pathogenesis-related protein 6 [Zea mays subsp. parviglumis] |
| GenBank | ACJ62629.1 | 0 | 1 | 333 | 1 | 333 | beta 1,3 glucanase [Zea mays subsp. parviglumis] |
| GenBank | ACJ62646.1 | 0 | 1 | 333 | 1 | 333 | beta 1,3 glucanase [Zea mays subsp. parviglumis] |
| GenBank | ACJ62691.1 | 0 | 1 | 333 | 1 | 333 | beta 1,3 glucanase [Zea mays subsp. parviglumis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 29 | 333 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 29 | 333 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 2cyg_A | 0 | 29 | 333 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 28 | 333 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 28 | 333 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
