y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00030872m |
Family | CE10 |
Protein Properties | Length: 325 Molecular Weight: 34061.6 Isoelectric Point: 5.3407 |
Chromosome | Chromosome/Scaffold: 006380 Start: 216 End: 1249 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 35 | 307 | 0 |
SVRRAQSPLDVVYDETYNLGLRVFVPSDGAEKLPVLVYFHGGGFCVGSFAMPEFHAACLRLAAELPAVVLSADYRLAPEHRLPAALDDAESLFSWLRTQA AATADPWLAESADFGRVFVSGDSAGASIAHHVAVRVGSGSLATGAVRVAGCALLYPYFGGERRTTSEAACPADKILTLPVSDQMWRLALPAGASRDHPLA NPFGPNSPALDSVALPPVLVAAGDRDMLVDRIREYAARLNATGNKRAELAVFPGQGHGFFTLEPDGEAAGELL |
Full Sequence |
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Protein Sequence Length: 325 Download |
MSSTTSPASD VSAEKPPPHV VEDLLGLVQL LSDGSVRRAQ SPLDVVYDET YNLGLRVFVP 60 SDGAEKLPVL VYFHGGGFCV GSFAMPEFHA ACLRLAAELP AVVLSADYRL APEHRLPAAL 120 DDAESLFSWL RTQAAATADP WLAESADFGR VFVSGDSAGA SIAHHVAVRV GSGSLATGAV 180 RVAGCALLYP YFGGERRTTS EAACPADKIL TLPVSDQMWR LALPAGASRD HPLANPFGPN 240 SPALDSVALP PVLVAAGDRD MLVDRIREYA ARLNATGNKR AELAVFPGQG HGFFTLEPDG 300 EAAGELLRVV LRRFVHGGTA APAS* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00312 | Esterase_lipase | 2.0e-8 | 53 | 190 | 147 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
COG2272 | PnbA | 2.0e-9 | 53 | 163 | 119 | + Carboxylesterase type B [Lipid metabolism] | ||
PRK10162 | PRK10162 | 1.0e-13 | 56 | 293 | 245 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 5.0e-34 | 11 | 299 | 292 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 2.0e-63 | 70 | 294 | 225 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO24912.1 | 0 | 11 | 317 | 1 | 328 | putative esterase [Oryza sativa Japonica Group] |
GenBank | EAY92127.1 | 0 | 11 | 317 | 1 | 328 | hypothetical protein OsI_13838 [Oryza sativa Indica Group] |
RefSeq | NP_001051515.1 | 0 | 11 | 317 | 19 | 346 | Os03g0790500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001152695.1 | 0 | 1 | 321 | 1 | 322 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | XP_002461496.1 | 0 | 1 | 318 | 1 | 356 | hypothetical protein SORBIDRAFT_02g003570 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 0 | 44 | 315 | 57 | 327 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 2o7r_A | 0 | 44 | 315 | 57 | 327 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_F | 2e-39 | 64 | 278 | 109 | 313 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_E | 2e-39 | 64 | 278 | 109 | 313 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_D | 2e-39 | 64 | 278 | 109 | 313 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL864745 | 265 | 3 | 246 | 0 |
FL707053 | 277 | 1 | 265 | 0 |
FL777818 | 266 | 1 | 254 | 0 |
FE655725 | 252 | 12 | 252 | 0 |
FL834484 | 248 | 1 | 236 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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