| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00030954m |
| Family | GT1 |
| Protein Properties | Length: 373 Molecular Weight: 41468.9 Isoelectric Point: 6.128 |
| Chromosome | Chromosome/Scaffold: 006346 Start: 9336 End: 13616 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 56 | 373 | 1.5e-27 |
| IVGTRGDVQPFIAIGKRLQDYGHRVRLATHANFKDFVMATGLEFYPLGGDPKVLAGYMVKNKGFLPANPSEIPIQRKQIRDIIFSLLPACKDPDIDTGIS FSADAIIANPAAYGHVHVAEALNIPIHIIFTMPWTPTCEFPHPFSRVKQSAGYRLSYQIVDSFVWLGIRDMINDLRKRKLKLRPVTYLSGTHAYSNDIPH AYIWSPYLVPKPKDWGPKIDVVGFCFLDLASNYEPPEPLLTWLGSGEKPIYIGFGSLPIPEPDKLTKIIVEALEITGQRGIINKGWGGLGNLEESKDFVY VLDNIPHDWLFLQCKAVV | |||
| Full Sequence |
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| Protein Sequence Length: 373 Download |
| MATLKDDGTV VVDIPTNLEA ASLDLPSEDN HSVAFGGEPL DSDLQHMPPM QIVMLIVGTR 60 GDVQPFIAIG KRLQDYGHRV RLATHANFKD FVMATGLEFY PLGGDPKVLA GYMVKNKGFL 120 PANPSEIPIQ RKQIRDIIFS LLPACKDPDI DTGISFSADA IIANPAAYGH VHVAEALNIP 180 IHIIFTMPWT PTCEFPHPFS RVKQSAGYRL SYQIVDSFVW LGIRDMINDL RKRKLKLRPV 240 TYLSGTHAYS NDIPHAYIWS PYLVPKPKDW GPKIDVVGFC FLDLASNYEP PEPLLTWLGS 300 GEKPIYIGFG SLPIPEPDKL TKIIVEALEI TGQRGIINKG WGGLGNLEES KDFVYVLDNI 360 PHDWLFLQCK AVV |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 5.0e-23 | 49 | 373 | 334 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 9.0e-38 | 52 | 196 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 2.0e-93 | 50 | 373 | 328 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC15827.1 | 0 | 1 | 373 | 112 | 489 | putative UDP-glucose:sterol glucosyltransferase [Oryza sativa Japonica Group] |
| DDBJ | BAH01184.1 | 0 | 1 | 373 | 79 | 452 | unnamed protein product [Oryza sativa Japonica Group] |
| RefSeq | NP_001059477.1 | 0 | 1 | 373 | 79 | 466 | Os07g0419500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002461897.1 | 0 | 1 | 373 | 46 | 430 | hypothetical protein SORBIDRAFT_02g010030 [Sorghum bicolor] |
| RefSeq | XP_002521125.1 | 0 | 1 | 373 | 131 | 504 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 0.000000000000001 | 50 | 373 | 1 | 289 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3h4i_A | 0.000000000000001 | 50 | 373 | 1 | 289 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1pnv_B | 0.00000000002 | 50 | 373 | 1 | 291 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1pnv_A | 0.00000000002 | 50 | 373 | 1 | 291 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1pn3_B | 0.00000000002 | 50 | 373 | 1 | 291 | A Chain A, Crystal Structure Of Tdp-Epi-Vancosaminyltransferase Gtfa In Complexes With Tdp And The Acceptor Substrate Dvv. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT046352 | 315 | 59 | 373 | 0 |
| GO883166 | 336 | 11 | 345 | 0 |
| FL915783 | 244 | 49 | 292 | 0 |
| JG877720 | 281 | 62 | 342 | 0 |
| FL856100 | 274 | 86 | 359 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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