Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00031126m |
Family | AA6 |
Protein Properties | Length: 205 Molecular Weight: 21561.6 Isoelectric Point: 6.6874 |
Chromosome | Chromosome/Scaffold: 006215 Start: 9863 End: 11045 |
Description | Quinone reductase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA6 | 5 | 201 | 0 |
KIYIVYYSTWGHVTALAEELKKGAESVDGVEVTVWRVPETLPEEVLGKMYAAPKREDHPVITARQLAEADGLLLGFPTRFGMMAAQMKAFLDSTGGLWQE QALAGKPAGFFFATGTQGGGQESTALTAVTQLAHHGMVYVPIGGTFGARMFGMDEVRGGSAYGAGTFAGADGSRTPSEIELAMANHQGKQFAAVAKK |
Full Sequence |
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Protein Sequence Length: 205 Download |
MAATKIYIVY YSTWGHVTAL AEELKKGAES VDGVEVTVWR VPETLPEEVL GKMYAAPKRE 60 DHPVITARQL AEADGLLLGF PTRFGMMAAQ MKAFLDSTGG LWQEQALAGK PAGFFFATGT 120 QGGGQESTAL TAVTQLAHHG MVYVPIGGTF GARMFGMDEV RGGSAYGAGT FAGADGSRTP 180 SEIELAMANH QGKQFAAVAK KLKA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00258 | Flavodoxin_1 | 2.0e-9 | 8 | 110 | 114 | + Flavodoxin. | ||
pfam03358 | FMN_red | 1.0e-10 | 19 | 147 | 131 | + NADPH-dependent FMN reductase. | ||
COG0655 | WrbA | 9.0e-39 | 1 | 204 | 210 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
TIGR01755 | flav_wrbA | 4.0e-60 | 4 | 202 | 199 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
PRK03767 | PRK03767 | 2.0e-73 | 4 | 204 | 203 | + NAD(P)H:quinone oxidoreductase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0009055 | electron carrier activity |
GO:0010181 | FMN binding |
GO:0016491 | oxidoreductase activity |
GO:0050662 | coenzyme binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF86423.1 | 0 | 3 | 203 | 2 | 200 | unknown [Zea mays] |
RefSeq | NP_001146036.1 | 0 | 2 | 204 | 3 | 206 | hypothetical protein LOC100279567 [Zea mays] |
RefSeq | XP_002461308.1 | 0 | 3 | 203 | 2 | 202 | hypothetical protein SORBIDRAFT_02g000630 [Sorghum bicolor] |
RefSeq | XP_002461673.1 | 0 | 1 | 204 | 5 | 210 | hypothetical protein SORBIDRAFT_02g006210 [Sorghum bicolor] |
RefSeq | XP_002518592.1 | 0 | 3 | 203 | 2 | 200 | Flavoprotein wrbA, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4dy4_C | 0 | 5 | 203 | 2 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 4dy4_A | 0 | 5 | 203 | 2 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_B | 0 | 5 | 203 | 3 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_A | 0 | 5 | 203 | 3 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6k_B | 0 | 5 | 203 | 3 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL950595 | 195 | 1 | 195 | 0 |
FL898662 | 195 | 1 | 195 | 0 |
FL898661 | 195 | 1 | 195 | 0 |
FL907630 | 195 | 1 | 195 | 0 |
FL922751 | 195 | 1 | 195 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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