Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00031272m |
Family | GH9 |
Protein Properties | Length: 497 Molecular Weight: 54264.6 Isoelectric Point: 7.1162 |
Chromosome | Chromosome/Scaffold: 007647 Start: 9678 End: 11573 |
Description | glycosyl hydrolase 9A4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 37 | 483 | 0 |
NYHDALTKSIIFLEAQRSGKLPPNNRVKWRGDSGLEDGKLANVDLTGGYYDAGDNVKYGLPLAFTVTTLAWTALAFKPELESAKEMEHVNEALRWGTDYL LKCAARKKKLWVQVGDPNLDHQCWVRPENMKAPRTLYEIDEKTPGTEIAAETAAAFAAASMVFRNDQKYSRALLNKAKLLFLFAKSHQGSYDGECPFYCS YSGYNDELLWAATWLYLATKRQLYADYISHEAISSSVAEFSWDLKFPGAQVLLAELNMTSGGGAQSFKTQADNFVCAVLPDTAFHQVFITPGGVIHLRDG ANTQYVTSTAFLFIVYSDLLLRTGQSVLCGSQPIRPERLREFARQQMDYLLGANPRGSSYVVGFGANPPTQPHHRGASTPVLPPGYDVNCGLSFGEWFAP DRPNPNELTGAIMGGPDKDDKFVDKRANSSYTEPCTYINSLAIGPLA |
Full Sequence |
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Protein Sequence Length: 497 Download |
MRALKHGTMR AHVALALAAM VLAGDALQPA LAAGGFNYHD ALTKSIIFLE AQRSGKLPPN 60 NRVKWRGDSG LEDGKLANVD LTGGYYDAGD NVKYGLPLAF TVTTLAWTAL AFKPELESAK 120 EMEHVNEALR WGTDYLLKCA ARKKKLWVQV GDPNLDHQCW VRPENMKAPR TLYEIDEKTP 180 GTEIAAETAA AFAAASMVFR NDQKYSRALL NKAKLLFLFA KSHQGSYDGE CPFYCSYSGY 240 NDELLWAATW LYLATKRQLY ADYISHEAIS SSVAEFSWDL KFPGAQVLLA ELNMTSGGGA 300 QSFKTQADNF VCAVLPDTAF HQVFITPGGV IHLRDGANTQ YVTSTAFLFI VYSDLLLRTG 360 QSVLCGSQPI RPERLREFAR QQMDYLLGAN PRGSSYVVGF GANPPTQPHH RGASTPVLPP 420 GYDVNCGLSF GEWFAPDRPN PNELTGAIMG GPDKDDKFVD KRANSSYTEP CTYINSLAIG 480 PLAALAVRGA QLVATH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 1.0e-137 | 30 | 486 | 474 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 1.0e-144 | 37 | 483 | 462 | + Glycosyl hydrolase family 9. | ||
PLN02266 | PLN02266 | 7.0e-146 | 37 | 492 | 469 | + endoglucanase | ||
PLN02613 | PLN02613 | 6.0e-164 | 32 | 485 | 460 | + endoglucanase | ||
PLN02909 | PLN02909 | 0 | 29 | 488 | 464 | + Endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF86783.1 | 0 | 1 | 496 | 1 | 497 | unknown [Zea mays] |
GenBank | EAZ07843.1 | 0 | 23 | 496 | 26 | 501 | hypothetical protein OsI_30101 [Oryza sativa Indica Group] |
RefSeq | NP_001048297.1 | 0 | 23 | 496 | 26 | 501 | Os02g0778600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151937.1 | 0 | 1 | 496 | 1 | 497 | endoglucanase [Zea mays] |
RefSeq | XP_002452914.1 | 0 | 1 | 496 | 1 | 497 | hypothetical protein SORBIDRAFT_04g034920 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 36 | 489 | 3 | 432 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1ksc_A | 0 | 36 | 489 | 3 | 432 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1ks8_A | 0 | 36 | 489 | 3 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 36 | 485 | 4 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 36 | 485 | 4 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |