| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00031307m |
| Family | GT8 |
| Protein Properties | Length: 544 Molecular Weight: 60846.4 Isoelectric Point: 8.6123 |
| Chromosome | Chromosome/Scaffold: 005939 Start: 7303 End: 10803 |
| Description | galacturonosyltransferase 4 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 224 | 516 | 0 |
| CLAMRLTTEYFSLDPKERQFPKRDSRQLDGYYHYAIFSDNVLASAVVVNSTIAQSKDPGRIMLHIVTDALNCPAMMMWFLTNPPTPAAVEVESLDDFKWL PGDFSSRFKLKGVRDPRYTSALNHLRFYLPEVFPSLSKVLLLDHDVVIQTDLSELWGIDMKGKVIGAVETCSSGEGYHRLDNLVDFSNPTIVNKFDAKAC IFAFGMNIFDLNEWRKQGLTATYHTWFQVGKRQRLWKAGSLPLGQLVFYNQTLPLDRRWHVLGLGHDFSIGRDELENAYVIHYSGKFKPWLEI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 544 Download |
| MRAASGGREP SSSSAAVVAL RALLIATACG LVFALLNLPD GRAGSAPPGG ERGAGAGGGA 60 RLSVEQGLIR EARRLNTIAE EIDGQSDESA AEEDERISKS PPDTKEKIWM MQDQLIMAKA 120 YLHFASPQGS AHLVRELKSR IKEIERAISH SSGGSHIPGS ALQKMKAMEQ TLSKAQRTYP 180 RCSQMTSKLR AMAHNSEELV RAHRSESSFL EQVAVRTLPK GHHCLAMRLT TEYFSLDPKE 240 RQFPKRDSRQ LDGYYHYAIF SDNVLASAVV VNSTIAQSKD PGRIMLHIVT DALNCPAMMM 300 WFLTNPPTPA AVEVESLDDF KWLPGDFSSR FKLKGVRDPR YTSALNHLRF YLPEVFPSLS 360 KVLLLDHDVV IQTDLSELWG IDMKGKVIGA VETCSSGEGY HRLDNLVDFS NPTIVNKFDA 420 KACIFAFGMN IFDLNEWRKQ GLTATYHTWF QVGKRQRLWK AGSLPLGQLV FYNQTLPLDR 480 RWHVLGLGHD FSIGRDELEN AYVIHYSGKF KPWLEISIPK YRDNWNRHLN YDNAYLQQCN 540 IHG* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02523 | PLN02523 | 4.0e-117 | 163 | 540 | 408 | + galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 4.0e-134 | 113 | 542 | 456 | + Probable galacturonosyltransferase | ||
| PLN02910 | PLN02910 | 4.0e-159 | 69 | 541 | 517 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02718 | PLN02718 | 0 | 84 | 542 | 462 | + Probable galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 0 | 66 | 541 | 498 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA94533.1 | 0 | 58 | 542 | 61 | 547 | Glycosyl transferase family 8 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAY81550.1 | 0 | 58 | 542 | 61 | 547 | hypothetical protein OsI_36716 [Oryza sativa Indica Group] |
| RefSeq | NP_001068191.1 | 0 | 140 | 542 | 1 | 403 | Os11g0592300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002307628.1 | 0 | 81 | 542 | 141 | 604 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
| RefSeq | XP_002451032.1 | 0 | 1 | 543 | 1 | 543 | hypothetical protein SORBIDRAFT_05g022970 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
