Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00031319m |
Family | CBM43 |
Protein Properties | Length: 117 Molecular Weight: 12527.4 Isoelectric Point: 8.262 |
Chromosome | Chromosome/Scaffold: 006956 Start: 7963 End: 8661 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 33 | 113 | 1.7e-29 |
WCVAKPSASNQVLLLNLNYACSQVSCAVIQKGGPCYYPDSLVSRAAVAMNLYYAANGRHPWNCYFNNSALVVRSDPSYGSC |
Full Sequence |
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Protein Sequence Length: 117 Download |
MTAQSPASLL LFSMGLMLLC FTSAGVADAQ KTWCVAKPSA SNQVLLLNLN YACSQVSCAV 60 IQKGGPCYYP DSLVSRAAVA MNLYYAANGR HPWNCYFNNS ALVVRSDPSY GSCTYY* 120 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-12 | 32 | 101 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-27 | 32 | 115 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF83843.1 | 0 | 29 | 116 | 29 | 116 | unknown [Zea mays] |
GenBank | ACG31507.1 | 0 | 29 | 116 | 29 | 116 | glucan endo-1,3-beta-glucosidase 4 precursor [Zea mays] |
GenBank | ACG36169.1 | 0 | 14 | 116 | 5 | 109 | glucan endo-1,3-beta-glucosidase 4 precursor [Zea mays] |
GenBank | ACG39487.1 | 0 | 22 | 116 | 28 | 122 | glucan endo-1,3-beta-glucosidase 4 precursor [Zea mays] |
RefSeq | XP_002454863.1 | 0 | 22 | 116 | 29 | 123 | hypothetical protein SORBIDRAFT_03g000270 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-23 | 22 | 115 | 2 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |