| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00031762m |
| Family | GT77 |
| Protein Properties | Length: 363 Molecular Weight: 41254 Isoelectric Point: 7.7677 |
| Chromosome | Chromosome/Scaffold: 0128803 Start: 487 End: 1816 |
| Description | Nucleotide-diphospho-sugar transferase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT77 | 117 | 339 | 0 |
| ISNYLVVALDDSIENFCKSNDVPVYRRDPDDGIDNIGKTGGNHAVSGLKFRVLREFLQLGYSVLLSDIDIIFFQNPFNYLYRDSDVESMSDGHNNMTAYG FNDVFDEPSMGWARYAHTMRIWVYNSGFFFIRPTIPSIELLDRVAGRLSREPKSWDQAVFNEELFFPSHPGYEGLHASKRTMDIYLFMNSKVLFKTVRKD AHLRQLKPVIVHLNYHPDKSDRM | |||
| Full Sequence |
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| Protein Sequence Length: 363 Download |
| ADSGACDTSR EVANLKSQLL SLEKKNAEFR KQINELSMKV QLAGQGKNEF LHKAGPFGTV 60 KALRTNPTVT QDLSINPRLA KILEQVAVKK ELIVALANSN VKEMLEMWFT NIKRAGISNY 120 LVVALDDSIE NFCKSNDVPV YRRDPDDGID NIGKTGGNHA VSGLKFRVLR EFLQLGYSVL 180 LSDIDIIFFQ NPFNYLYRDS DVESMSDGHN NMTAYGFNDV FDEPSMGWAR YAHTMRIWVY 240 NSGFFFIRPT IPSIELLDRV AGRLSREPKS WDQAVFNEEL FFPSHPGYEG LHASKRTMDI 300 YLFMNSKVLF KTVRKDAHLR QLKPVIVHLN YHPDKSDRMK AVIEFYVNGK QNALEHFPDG 360 SE* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03407 | Nucleotid_trans | 4.0e-58 | 117 | 340 | 230 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005783 | endoplasmic reticulum |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC83249.1 | 0 | 1 | 362 | 65 | 426 | hypothetical protein [Oryza sativa Japonica Group] |
| GenBank | EEC82354.1 | 0 | 1 | 362 | 65 | 426 | hypothetical protein OsI_26669 [Oryza sativa Indica Group] |
| GenBank | EEE67496.1 | 0 | 1 | 362 | 29 | 390 | hypothetical protein OsJ_24927 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060135.1 | 0 | 1 | 362 | 97 | 458 | Os07g0587100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001140234.1 | 0 | 1 | 362 | 62 | 423 | hypothetical protein LOC100272274 [Zea mays] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GO883664 | 306 | 2 | 307 | 0 |
| GO848535 | 300 | 64 | 363 | 0 |
| JG930876 | 262 | 35 | 296 | 0 |
| JG930876 | 24 | 295 | 318 | 0.003 |
| GO883664 | 34 | 300 | 333 | 0.009 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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