Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00032019m |
Family | GT75 |
Protein Properties | Length: 358 Molecular Weight: 40528.7 Isoelectric Point: 6.6641 |
Chromosome | Chromosome/Scaffold: 012901 Start: 4720 End: 7600 |
Description | reversibly glycosylated polypeptide 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT75 | 8 | 343 | 0 |
LKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIIQDGDPSKSIRVPEGFDYELYNRNDINRMLGPKASCISFKDSACRCFGYMVSKKKYVYTIDDDCFVAK DPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYRDGADFVRGYPFSLREGVPTVVSHGLWLNIPDYDAPTQLVKPLERNTRYVDAILTIPKGTLFPMCGM NLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVITDHLGLGVKTGLPYIWHSKASNPFVNLKKEYNGIFWQEELIPFFQSVSLPKDATTVQKCYL ELAKQVRAKLGKVDSYFNKLADSMVTWIEAWDELNP |
Full Sequence |
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Protein Sequence Length: 358 Download |
MASAPPLLKD ELDIVIPTIR NLDFLEMWRP FFQPYHLIII QDGDPSKSIR VPEGFDYELY 60 NRNDINRMLG PKASCISFKD SACRCFGYMV SKKKYVYTID DDCFVAKDPS GKDINALEQH 120 IKNLLSPSTP FFFNTLYDPY RDGADFVRGY PFSLREGVPT VVSHGLWLNI PDYDAPTQLV 180 KPLERNTRYV DAILTIPKGT LFPMCGMNLA FDRELIGPAM YFGLMGDGQP IGRYDDMWAG 240 WCTKVITDHL GLGVKTGLPY IWHSKASNPF VNLKKEYNGI FWQEELIPFF QSVSLPKDAT 300 TVQKCYLELA KQVRAKLGKV DSYFNKLADS MVTWIEAWDE LNPPKGGVAT ANGPPKK* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03180 | PLN03180 | 0 | 1 | 345 | 345 | + reversibly glycosylated polypeptide; Provisional | ||
pfam03214 | RGP | 0 | 7 | 345 | 344 | + Reversibly glycosylated polypeptide. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0007047 | : GO:0044234 |
GO:0008466 | glycogenin glucosyltransferase activity |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030054 | cell junction |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27755.1 | 0 | 1 | 357 | 1 | 361 | unknown [Zea mays] |
GenBank | EEC82411.1 | 0 | 6 | 356 | 14 | 364 | hypothetical protein OsI_26792 [Oryza sativa Indica Group] |
RefSeq | NP_001060224.1 | 0 | 6 | 356 | 14 | 364 | Os07g0604800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148994.1 | 0 | 1 | 357 | 1 | 361 | LOC100282614 [Zea mays] |
RefSeq | XP_002460988.1 | 0 | 6 | 357 | 10 | 361 | hypothetical protein SORBIDRAFT_02g038770 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO810375 | 353 | 4 | 356 | 0 |
HO852574 | 351 | 6 | 356 | 0 |
CU575244 | 357 | 2 | 356 | 0 |
CU572514 | 354 | 2 | 353 | 0 |
CX109310 | 354 | 2 | 353 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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