y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00032027m |
Family | CE10 |
Protein Properties | Length: 372 Molecular Weight: 39523.4 Isoelectric Point: 6.4482 |
Chromosome | Chromosome/Scaffold: 012567 Start: 1558 End: 3068 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 77 | 370 | 0 |
HTLHDLPGEPNLRVYIPEVAEGGRARLPVILQLHGGGFCISHPSWLMYHHFYARLACAVPAVVVAVELPLAPERRLPAHIDAGVAALRRLRSIALASEDG GGALDDPAAALLRGAADVSRVFLVGDSSGGNLVHLVAAEAGRGGASEWAPLRVAGGIPIHPGFVRAARSRSELETKAASVFFTLDMLDKFLALALPEGAT KDHPFTCPMGPLAPPLASVPLPPMLVAVAEDDLIRDTNLEYCDALRAAGKEVEVLLSRRMSHSFYLNKYAVDMDPATGERARELIDAIRSFIAR |
Full Sequence |
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Protein Sequence Length: 372 Download |
MSVHAAPPAA AMAPANVEQQ QRQVRAAAGG GRKVVDEVSG WLRVLDDGSV DRTWTGPPEA 60 LPLMQPVAPY AEPRDGHTLH DLPGEPNLRV YIPEVAEGGR ARLPVILQLH GGGFCISHPS 120 WLMYHHFYAR LACAVPAVVV AVELPLAPER RLPAHIDAGV AALRRLRSIA LASEDGGGAL 180 DDPAAALLRG AADVSRVFLV GDSSGGNLVH LVAAEAGRGG ASEWAPLRVA GGIPIHPGFV 240 RAARSRSELE TKAASVFFTL DMLDKFLALA LPEGATKDHP FTCPMGPLAP PLASVPLPPM 300 LVAVAEDDLI RDTNLEYCDA LRAAGKEVEV LLSRRMSHSF YLNKYAVDMD PATGERAREL 360 IDAIRSFIAR H* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0657 | Aes | 5.0e-11 | 88 | 371 | 284 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 3.0e-23 | 106 | 342 | 237 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY98033.1 | 0 | 36 | 371 | 31 | 362 | hypothetical protein OsI_19949 [Oryza sativa Indica Group] |
RefSeq | NP_001055531.1 | 0 | 36 | 371 | 31 | 362 | Os05g0410200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001152160.1 | 0 | 31 | 371 | 19 | 359 | hsr203J [Zea mays] |
RefSeq | XP_002439797.1 | 0 | 12 | 371 | 1 | 362 | hypothetical protein SORBIDRAFT_09g020220 [Sorghum bicolor] |
RefSeq | XP_002439798.1 | 0 | 12 | 371 | 1 | 363 | hypothetical protein SORBIDRAFT_09g020230 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 1e-28 | 103 | 342 | 113 | 330 | A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations |
PDB | 2zsh_A | 1e-28 | 103 | 342 | 113 | 330 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 6e-28 | 103 | 342 | 112 | 329 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 6e-28 | 103 | 342 | 112 | 329 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 6e-28 | 103 | 342 | 112 | 329 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV475625 | 247 | 36 | 282 | 0 |
CK162633 | 244 | 36 | 279 | 0 |
CT842910 | 237 | 36 | 272 | 0 |
HX140045 | 255 | 118 | 372 | 0 |
EG631279 | 339 | 36 | 372 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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