Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00032585m |
Family | GT8 |
Protein Properties | Length: 494 Molecular Weight: 57052.1 Isoelectric Point: 10.0054 |
Chromosome | Chromosome/Scaffold: 0125012 Start: 67 End: 2483 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 155 | 465 | 0 |
CLALRLTNEYYSSSTNKKQFPYEEKFEDPKLQHYALFSDNVLAAAVVVNSTIINAKNPASHVFHIVTDKQNYAAMRMWFLANPIGETAVQVQNIADFTWL NSSYSPVLKQLESHFMINYYFNTNQDKPGKNPKFQNPKYLSILNHLRFYLPEILPKLSRVLFLDDDIIVQKDLSYLWSIDLKGKVNGAVHTCGETFHRFD RYLNFSNPLIAKKFDRRACGWAYGMNMFDLSEWRKQNITGVYHYWQNLNADRQLWKLGTLPAGLVTFWNHTFPLDRSWHLLGLGYKPNVNQRDIERAAVI HYNGNRKPWLE |
Full Sequence |
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Protein Sequence Length: 494 Download |
EISADRSSEQ FRGDTSRERD AEAASSSTSH NASQPDAMVR VIKNQLRTAK TYIGLLPSRG 60 RHAFVRDLRR KMRDIQQALG DATSDKRLPK NVHGKIRAME LTLAKIKQVH DNCAAIIDKL 120 LATLHSTEDQ VQAQKQKANY VAQIAAKAIP KRLYCLALRL TNEYYSSSTN KKQFPYEEKF 180 EDPKLQHYAL FSDNVLAAAV VVNSTIINAK NPASHVFHIV TDKQNYAAMR MWFLANPIGE 240 TAVQVQNIAD FTWLNSSYSP VLKQLESHFM INYYFNTNQD KPGKNPKFQN PKYLSILNHL 300 RFYLPEILPK LSRVLFLDDD IIVQKDLSYL WSIDLKGKVN GAVHTCGETF HRFDRYLNFS 360 NPLIAKKFDR RACGWAYGMN MFDLSEWRKQ NITGVYHYWQ NLNADRQLWK LGTLPAGLVT 420 FWNHTFPLDR SWHLLGLGYK PNVNQRDIER AAVIHYNGNR KPWLEIGLPV YRQFWSKYVN 480 FNNVYLRECN INP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 3.0e-177 | 86 | 493 | 413 | + galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 35 | 493 | 459 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 30 | 492 | 467 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 35 | 491 | 465 | + Probable galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 36 | 491 | 459 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD10126.1 | 0 | 3 | 493 | 211 | 726 | glycosyltransferase family-like [Oryza sativa Japonica Group] |
EMBL | CAJ19325.1 | 0 | 1 | 493 | 206 | 697 | glycosyl transferase-like protein [Triticum aestivum] |
EMBL | CAJ75629.1 | 0 | 1 | 493 | 1 | 501 | glycosyl transferase-like protein [Brachypodium sylvaticum] |
GenBank | EEE68930.1 | 0 | 3 | 493 | 208 | 723 | hypothetical protein OsJ_27797 [Oryza sativa Japonica Group] |
RefSeq | XP_002460421.1 | 0 | 3 | 493 | 206 | 705 | hypothetical protein SORBIDRAFT_02g027840 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.003 | 290 | 463 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO795725 | 455 | 40 | 494 | 0 |
JG890961 | 275 | 185 | 459 | 0 |
DW237421 | 315 | 153 | 467 | 0 |
GO877937 | 291 | 204 | 494 | 0 |
GO877254 | 323 | 117 | 439 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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