y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00032841m |
Family | AA1 |
Protein Properties | Length: 635 Molecular Weight: 66083.4 Isoelectric Point: 7.1942 |
Chromosome | Chromosome/Scaffold: 012479 Start: 2793 End: 7498 |
Description | laccase 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 65 | 519 | 0 |
RHGVLQLMTPWADGPSLVSQCPIQPSGSYTYRFGVPGQEGTLWWHAHSSFLRATVYGAFIVRPRAGNAYPFPAPDMEVPIVLGEWWNRNVVDVESDALLA GQLPAQSDAFTVNGKTGLLYPCANDTFTAVVEPNARVLLRVINAGLNSHLFFKVAGHNFTVVAVDAGYTSNLNTDTLVLAPGQTVDALVDTAAAPGSYYM AVQAHDTMSPLTFAASDTTTATAILQYNGTSTSPPAMPAMPSSSDAATANAFYFGLRGLGTPAVPSPVDVSMTIELGLGQLPCDPSQTRCNGTAAAAAMN GVSFRLPGPQASLLGAHANGLAGVFTADFPDGPPPSGTAMAVGTKVRKVSFNSVVEIVLQNPSAVPTENHPIHLHGFNFFVLAQGVGPFTPASVAYNLVD PVARNTIAVPGGGWAVIRFVANNPGMWFFHCHLDPHVPMGLGMVFHVDSGTTPGS |
Full Sequence |
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Protein Sequence Length: 635 Download |
MVRLLLALAL LLVGRLADAA TVKYTFTKAE AFGKKTNLLQ FVRSASMKEQ GVQVRELHSS 60 EFSIRHGVLQ LMTPWADGPS LVSQCPIQPS GSYTYRFGVP GQEGTLWWHA HSSFLRATVY 120 GAFIVRPRAG NAYPFPAPDM EVPIVLGEWW NRNVVDVESD ALLAGQLPAQ SDAFTVNGKT 180 GLLYPCANDT FTAVVEPNAR VLLRVINAGL NSHLFFKVAG HNFTVVAVDA GYTSNLNTDT 240 LVLAPGQTVD ALVDTAAAPG SYYMAVQAHD TMSPLTFAAS DTTTATAILQ YNGTSTSPPA 300 MPAMPSSSDA ATANAFYFGL RGLGTPAVPS PVDVSMTIEL GLGQLPCDPS QTRCNGTAAA 360 AAMNGVSFRL PGPQASLLGA HANGLAGVFT ADFPDGPPPS GTAMAVGTKV RKVSFNSVVE 420 IVLQNPSAVP TENHPIHLHG FNFFVLAQGV GPFTPASVAY NLVDPVARNT IAVPGGGWAV 480 IRFVANNPGM WFFHCHLDPH VPMGLGMVFH VDSGTTPGST LPPPPANWVG VCDAQSYAAA 540 AAAEVAPAPA LSPAPAPALA PASAPGPANS PRAAAGSPVI PPRAVDHKPS PNLPQHRDGG 600 LPSSRSTAGP RAAGHLTGLL CIILLLFVLH QHKA* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00394 | Cu-oxidase | 1.0e-30 | 141 | 267 | 131 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
PLN02354 | PLN02354 | 6.0e-35 | 66 | 491 | 439 | + copper ion binding / oxidoreductase | ||
pfam07731 | Cu-oxidase_2 | 5.0e-38 | 385 | 512 | 128 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
TIGR03388 | ascorbase | 2.0e-54 | 57 | 509 | 499 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 8.0e-162 | 66 | 512 | 468 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL73970.1 | 0 | 52 | 527 | 80 | 559 | AF465470_1 laccase LAC5-4 [Lolium perenne] |
GenBank | EEC71811.1 | 0 | 16 | 527 | 25 | 555 | hypothetical protein OsI_04449 [Oryza sativa Indica Group] |
RefSeq | NP_001044815.1 | 0 | 16 | 527 | 25 | 555 | Os01g0850700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001105789.1 | 0 | 16 | 634 | 19 | 641 | laccase 1 [Zea mays] |
RefSeq | XP_002456640.1 | 0 | 66 | 634 | 82 | 649 | hypothetical protein SORBIDRAFT_03g039970 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 56 | 509 | 51 | 521 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |
PDB | 1asq_A | 0 | 56 | 509 | 51 | 521 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |
PDB | 1asp_B | 0 | 56 | 509 | 51 | 521 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |
PDB | 1asp_A | 0 | 56 | 509 | 51 | 521 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |
PDB | 1aso_B | 0 | 56 | 509 | 51 | 521 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |