| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00032842m |
| Family | AA1 |
| Protein Properties | Length: 618 Molecular Weight: 64024.7 Isoelectric Point: 6.4177 |
| Chromosome | Chromosome/Scaffold: 012479 Start: 2793 End: 7498 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 3 | 502 | 0 |
| INQLCSTTSIIAVNGQLPGPSIEVNEGDAVEVKVINNSPYNVTIHWHGVLQLMTPWADGPSLVSQCPIQPSGSYTYRFGVPGQEGTLWWHAHSSFLRATV YGAFIVRPRAGNAYPFPAPDMEVPIVLGEWWNRNVVDVESDALLAGQLPAQSDAFTVNGKTGLLYPCANDTFTAVVEPNARVLLRVINAGLNSHLFFKVA GHNFTVVAVDAGYTSNLNTDTLVLAPGQTVDALVDTAAAPGSYYMAVQAHDTMSPLTFAASDTTTATAILQYNGTSTSPPAMPAMPSSSDAATANAFYFG LRGLGTPAVPSPVDVSMTIELGLGQLPCDPSQTRCNGTAAAAAMNGVSFRLPGPQASLLGAHANGLAGVFTADFPDGPPPSGTAMAVGTKVRKVSFNSVV EIVLQNPSAVPTENHPIHLHGFNFFVLAQGVGPFTPASVAYNLVDPVARNTIAVPGGGWAVIRFVANNPGMWFFHCHLDPHVPMGLGMVFHVDSGTTPGS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 618 Download |
| MQINQLCSTT SIIAVNGQLP GPSIEVNEGD AVEVKVINNS PYNVTIHWHG VLQLMTPWAD 60 GPSLVSQCPI QPSGSYTYRF GVPGQEGTLW WHAHSSFLRA TVYGAFIVRP RAGNAYPFPA 120 PDMEVPIVLG EWWNRNVVDV ESDALLAGQL PAQSDAFTVN GKTGLLYPCA NDTFTAVVEP 180 NARVLLRVIN AGLNSHLFFK VAGHNFTVVA VDAGYTSNLN TDTLVLAPGQ TVDALVDTAA 240 APGSYYMAVQ AHDTMSPLTF AASDTTTATA ILQYNGTSTS PPAMPAMPSS SDAATANAFY 300 FGLRGLGTPA VPSPVDVSMT IELGLGQLPC DPSQTRCNGT AAAAAMNGVS FRLPGPQASL 360 LGAHANGLAG VFTADFPDGP PPSGTAMAVG TKVRKVSFNS VVEIVLQNPS AVPTENHPIH 420 LHGFNFFVLA QGVGPFTPAS VAYNLVDPVA RNTIAVPGGG WAVIRFVANN PGMWFFHCHL 480 DPHVPMGLGM VFHVDSGTTP GSTLPPPPAN WVGVCDAQSY AAAAAAEVAP APALSPAPAP 540 ALAPASAPGP ANSPRAAAGS PVIPPRAVDH KPSPNLPQHR DGGLPSSRST AGPRAAGHLT 600 GLLCIILLLF VLHQHKA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 8.0e-42 | 2 | 492 | 538 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| PLN02354 | PLN02354 | 1.0e-42 | 12 | 474 | 476 | + copper ion binding / oxidoreductase | ||
| pfam07732 | Cu-oxidase_3 | 2.0e-47 | 1 | 113 | 115 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03388 | ascorbase | 9.0e-68 | 7 | 492 | 532 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 3 | 495 | 514 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL73970.1 | 0 | 1 | 510 | 49 | 559 | AF465470_1 laccase LAC5-4 [Lolium perenne] |
| GenBank | EEC71811.1 | 0 | 1 | 510 | 40 | 555 | hypothetical protein OsI_04449 [Oryza sativa Indica Group] |
| RefSeq | NP_001044815.1 | 0 | 1 | 510 | 40 | 555 | Os01g0850700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105789.1 | 0 | 1 | 617 | 34 | 641 | laccase 1 [Zea mays] |
| RefSeq | XP_002456640.1 | 0 | 1 | 617 | 34 | 649 | hypothetical protein SORBIDRAFT_03g039970 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 7 | 492 | 19 | 521 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |
| PDB | 1asq_A | 0 | 7 | 492 | 19 | 521 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |
| PDB | 1asp_B | 0 | 7 | 492 | 19 | 521 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |
| PDB | 1asp_A | 0 | 7 | 492 | 19 | 521 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |
| PDB | 1aso_B | 0 | 7 | 492 | 19 | 521 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |
