| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00032843m |
| Family | AA1 |
| Protein Properties | Length: 346 Molecular Weight: 36264.1 Isoelectric Point: 5.2645 |
| Chromosome | Chromosome/Scaffold: 012479 Start: 9936 End: 11582 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 1 | 336 | 0 |
| VAGHTFTVVAADASYTTPYETDVIVIAPGQTVDALMAAGATPGCYYMEISSYQSAMPLRLGSFNIDVATAVVEYVGAAPTTDGGQQAAPARPEMPKPTDT ATANGFYTGLTARVLPGRPTVPLAVDTRMFVTVGLGLSSCLPEQTSCNRSAPEAVATMNNESFALPTTTSLLDARYGKAPGGVYTNDFPDRPPVAFDYTN ATGLLAGGAAAALSSTGRPTTKVRALRYNATVEVVLQNTALLGRESHPMHLHGFNFFVLAQGFGNYGGAASEQLNLVNPQQRNTIAVPTGGWVVIRFVAD NPGMWFMHCHIDSHLSIGLAMVFAVEDGPTPDTKLP | |||
| Full Sequence |
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| Protein Sequence Length: 346 Download |
| VAGHTFTVVA ADASYTTPYE TDVIVIAPGQ TVDALMAAGA TPGCYYMEIS SYQSAMPLRL 60 GSFNIDVATA VVEYVGAAPT TDGGQQAAPA RPEMPKPTDT ATANGFYTGL TARVLPGRPT 120 VPLAVDTRMF VTVGLGLSSC LPEQTSCNRS APEAVATMNN ESFALPTTTS LLDARYGKAP 180 GGVYTNDFPD RPPVAFDYTN ATGLLAGGAA AALSSTGRPT TKVRALRYNA TVEVVLQNTA 240 LLGRESHPMH LHGFNFFVLA QGFGNYGGAA SEQLNLVNPQ QRNTIAVPTG GWVVIRFVAD 300 NPGMWFMHCH IDSHLSIGLA MVFAVEDGPT PDTKLPPPPP DLPRC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02604 | PLN02604 | 3.0e-29 | 1 | 328 | 338 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 5.0e-33 | 1 | 324 | 335 | + L-ascorbate oxidase | ||
| TIGR03388 | ascorbase | 6.0e-43 | 1 | 324 | 336 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07731 | Cu-oxidase_2 | 2.0e-43 | 187 | 328 | 142 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 5.0e-105 | 1 | 328 | 330 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC78752.1 | 0 | 1 | 345 | 238 | 576 | hypothetical protein OsI_18967 [Oryza sativa Indica Group] |
| GenBank | EEE55676.1 | 0 | 1 | 326 | 219 | 541 | hypothetical protein OsJ_04090 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q5N7A3 | 0 | 1 | 326 | 239 | 561 | LAC6_ORYSJ RecName: Full=Laccase-6; AltName: Full=Benzenediol:oxygen oxidoreductase 6; AltName: Full=Urishiol oxidase 6; AltName: Full=Diphenol oxidase 6; Flags: Precursor |
| RefSeq | XP_002442097.1 | 0 | 1 | 345 | 242 | 576 | hypothetical protein SORBIDRAFT_08g011530 [Sorghum bicolor] |
| RefSeq | XP_002456639.1 | 0 | 1 | 345 | 228 | 565 | hypothetical protein SORBIDRAFT_03g039960 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 5e-32 | 1 | 324 | 231 | 522 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |
| PDB | 1asq_A | 5e-32 | 1 | 324 | 231 | 522 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |
| PDB | 1asp_B | 5e-32 | 1 | 324 | 231 | 522 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus K150a Active Site Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EG377960 | 213 | 117 | 328 | 0 |
| DY941206 | 303 | 1 | 301 | 0 |
| EG384947 | 237 | 96 | 328 | 0 |
| FL869217 | 259 | 25 | 279 | 0 |
| EG383867 | 210 | 123 | 328 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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