| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00032912m |
| Family | AA1 |
| Protein Properties | Length: 348 Molecular Weight: 37493.6 Isoelectric Point: 6.906 |
| Chromosome | Chromosome/Scaffold: 012577 Start: 10 End: 1505 |
| Description | laccase 2 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 1 | 334 | 0 |
| MLRLINSALNDELFFGIANHTLTVVEADASYVKPFTVQTLVISPGQAMNVLLTTAPSPASPAYAMAISPYTNTQGTFDNTAAAAVLEYAPTPAAAARSLP LPALPLYNDTGAVTNFSRNFRSLASAQYPAAVPLAVDRHLLFTVGLGTDPCPSNQTCQGPNGTKFAASINNNSFFRPRTALLEAHYQRRYAGVLLANFPT TPPHPFNYTGTPPNNTFVQHGTRVVPLKFNTSVELVLQGTSIQGAESHPLHLHGYNFFVVGEGFGNFDPVNDPPKYNLADPVERNTISVPTAGWVALRFL ADNPGVWLMHCHFDVHLSWGLSMAWLVNDGPLPN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 348 Download |
| MLRLINSALN DELFFGIANH TLTVVEADAS YVKPFTVQTL VISPGQAMNV LLTTAPSPAS 60 PAYAMAISPY TNTQGTFDNT AAAAVLEYAP TPAAAARSLP LPALPLYNDT GAVTNFSRNF 120 RSLASAQYPA AVPLAVDRHL LFTVGLGTDP CPSNQTCQGP NGTKFAASIN NNSFFRPRTA 180 LLEAHYQRRY AGVLLANFPT TPPHPFNYTG TPPNNTFVQH GTRVVPLKFN TSVELVLQGT 240 SIQGAESHPL HLHGYNFFVV GEGFGNFDPV NDPPKYNLAD PVERNTISVP TAGWVALRFL 300 ADNPGVWLMH CHFDVHLSWG LSMAWLVNDG PLPNQKMLPP PSDLPKC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 2.0e-22 | 2 | 325 | 329 | + L-ascorbate oxidase | ||
| pfam07731 | Cu-oxidase_2 | 2.0e-30 | 198 | 331 | 140 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02604 | PLN02604 | 1.0e-34 | 13 | 321 | 316 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-35 | 7 | 321 | 322 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 6.0e-154 | 1 | 347 | 348 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG47007.1 | 0 | 1 | 347 | 235 | 582 | L-ascorbate oxidase precursor [Zea mays] |
| RefSeq | NP_001105921.1 | 0 | 11 | 347 | 247 | 588 | putative laccase [Zea mays] |
| Swiss-Prot | Q0DHL5 | 0 | 1 | 347 | 188 | 539 | LAC11_ORYSJ RecName: Full=Putative laccase-11; AltName: Full=Benzenediol:oxygen oxidoreductase 11; AltName: Full=Urishiol oxidase 11; AltName: Full=Diphenol oxidase 11 |
| RefSeq | XP_002441216.1 | 0 | 1 | 347 | 190 | 544 | hypothetical protein SORBIDRAFT_09g022460 [Sorghum bicolor] |
| RefSeq | XP_002456622.1 | 0 | 1 | 347 | 234 | 579 | hypothetical protein SORBIDRAFT_03g039570 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 8e-35 | 2 | 324 | 216 | 520 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asq_A | 8e-35 | 2 | 324 | 216 | 520 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asp_B | 8e-35 | 2 | 324 | 216 | 520 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1asp_A | 8e-35 | 2 | 324 | 216 | 520 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 1aso_B | 8e-35 | 2 | 324 | 216 | 520 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| FL741084 | 211 | 138 | 348 | 0 |
| FL865901 | 237 | 17 | 253 | 0 |
| BI958400 | 208 | 107 | 314 | 0 |
| HX183449 | 237 | 1 | 236 | 0 |
| GR366996 | 257 | 37 | 293 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |