Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00033311m |
Family | GH35 |
Protein Properties | Length: 700 Molecular Weight: 77407.1 Isoelectric Point: 7.8557 |
Chromosome | Chromosome/Scaffold: 012743 Start: 5526 End: 9637 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 51 | 252 | 0 |
VIDGQRRIILSGSIHYPRSTPQMWPGLIRKAKEGGLNTIETYVFWNGHEPRRRQYNFEGNYDIVRFFKEIQHAGMYAILRIGPYICGEWNYGGLPAWLRN IPGMQFRLHNDPFEGGPIILAQIENEYGNIMGELNNNQSASQYIHWCADMANKQKVGVPWIMCQQNHHVPHNVINTCNGFYCHDWLPNRTGIPKIWTENW TG |
Full Sequence |
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Protein Sequence Length: 700 Download |
CSLLLAHDAL PTRLRRSLHH GRRAARAAPP PHQSSCSPTT TTVAYNDRAV VIDGQRRIIL 60 SGSIHYPRST PQMWPGLIRK AKEGGLNTIE TYVFWNGHEP RRRQYNFEGN YDIVRFFKEI 120 QHAGMYAILR IGPYICGEWN YGGLPAWLRN IPGMQFRLHN DPFEGGPIIL AQIENEYGNI 180 MGELNNNQSA SQYIHWCADM ANKQKVGVPW IMCQQNHHVP HNVINTCNGF YCHDWLPNRT 240 GIPKIWTENW TGCGTNFGRT SGGPYITTSY DYDAPLDEYG NIRQPKYGHL KDLHNLLKSM 300 EKILVHGEHN DTTYARNVTV TKYTYGGSSV CFISNESADR DVNVTLGATH LVPAWPVSIL 360 PDCKTAYNTA KEEPGALRWS WMPENLRPFM TDDRGSFRKT QLLDQIAAAT DQSDYLWYRT 420 SLEHKGEGAY KLYVNTTGHA IYAFVNGKLV GQNHSTNGAF VFQLETPVKL QSGKNYISLL 480 SGTVDLKNYG PLFELMPAGI AGGPVKLVGT NGTDIDLTNS SWFYKSGLAG EQRQIHLDKA 540 GYKWRSHNSS GIPVNRPFTW YKTTFAAPAG EEAVVVDLLG LNKGAAWVNS NSLGRYWPSY 600 TAAEMDGCHP SQRFYHVPRA FLRAGEPNTL VLFEEAGGDP TRAAFHTVAV GAVCVAAAEV 660 GDDVTLACGG HGRVVASVDV ASFGVTRGSC GGYEGGCES* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0004 | 65 | 148 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 9.0e-17 | 51 | 179 | 157 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-117 | 51 | 297 | 317 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 34 | 645 | 708 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27651.1 | 0 | 39 | 699 | 19 | 780 | unknown [Zea mays] |
GenBank | EEC66744.1 | 0 | 41 | 699 | 25 | 783 | hypothetical protein OsI_33101 [Oryza sativa Indica Group] |
RefSeq | NP_001043252.1 | 0 | 41 | 699 | 29 | 786 | Os01g0533400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001064366.1 | 0 | 41 | 699 | 29 | 787 | Os10g0330600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002457961.1 | 0 | 46 | 699 | 31 | 789 | hypothetical protein SORBIDRAFT_03g023500 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 3e-30 | 35 | 293 | 2 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 3e-25 | 52 | 281 | 12 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 3e-25 | 52 | 281 | 12 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL814922 | 235 | 368 | 602 | 0 |
HO778160 | 704 | 42 | 646 | 0 |
FL814923 | 246 | 425 | 647 | 0 |
FL814923 | 15 | 416 | 430 | 0.5 |
FL814923 | 10 | 406 | 415 | 0.5 |
Sequence Alignments (This image is cropped. Click for full image.) |
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