Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00033312m |
Family | GH17 |
Protein Properties | Length: 242 Molecular Weight: 25062.6 Isoelectric Point: 4.0152 |
Chromosome | Chromosome/Scaffold: 0123841 Start: 38 End: 798 |
Description | beta-1,3-glucanase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 17 | 240 | 0 |
AAALSFRYIAVGNEVSGGDTNSILPAMQNVNSALANAGLGNIKVSTAVQSGVTQGFPPSQGSFSQGYMGPIAQYLQSTGAPLLCNVYPYFAYTGNEAQID LSYALLTSSGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAGGAAATPGNAQTYNQNLINHVGQGTPKRPGPIETYIFAMFNEDQK QGAETERHFGLFNPDKSPAYPINF |
Full Sequence |
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Protein Sequence Length: 242 Download |
MDVPNSDLSS LASDPNAAAL SFRYIAVGNE VSGGDTNSIL PAMQNVNSAL ANAGLGNIKV 60 STAVQSGVTQ GFPPSQGSFS QGYMGPIAQY LQSTGAPLLC NVYPYFAYTG NEAQIDLSYA 120 LLTSSGTVVQ DGSNAYQNLF DALVDTFVSA LENAGAGNVG VVVSESGWPS AGGAAATPGN 180 AQTYNQNLIN HVGQGTPKRP GPIETYIFAM FNEDQKQGAE TERHFGLFNP DKSPAYPINF 240 S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 3.0e-97 | 1 | 240 | 260 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ62629.1 | 0 | 1 | 241 | 81 | 334 | beta 1,3 glucanase [Zea mays subsp. parviglumis] |
GenBank | ACJ62646.1 | 0 | 1 | 241 | 81 | 334 | beta 1,3 glucanase [Zea mays subsp. parviglumis] |
GenBank | ACJ62696.1 | 0 | 1 | 241 | 81 | 334 | beta 1,3 glucanase [Zea mays subsp. parviglumis] |
RefSeq | XP_002459073.1 | 0 | 1 | 241 | 83 | 336 | hypothetical protein SORBIDRAFT_03g045450 [Sorghum bicolor] |
RefSeq | XP_002459074.1 | 0 | 1 | 241 | 80 | 332 | hypothetical protein SORBIDRAFT_03g045460 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 1 | 240 | 52 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 20 | 240 | 83 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 20 | 240 | 83 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 20 | 240 | 83 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1ghs_B | 0 | 1 | 240 | 52 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BU103698 | 254 | 1 | 242 | 0 |
CA180691 | 216 | 25 | 240 | 0 |
EE292337 | 225 | 19 | 242 | 0 |
EC873759 | 225 | 19 | 242 | 0 |
EE161193 | 225 | 19 | 242 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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