| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00033462m |
| Family | GT8 |
| Protein Properties | Length: 225 Molecular Weight: 26488.3 Isoelectric Point: 9.1738 |
| Chromosome | Chromosome/Scaffold: 0273485 Start: 1 End: 1528 |
| Description | galacturonosyltransferase 4 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT8 | 18 | 196 | 0 |
| KYRNPKYLSILNHLRFYLPEIYPKLDKMVFLDDDIVVKKDLTGLWSINMKGKVNGAVETCGESFHRFDRYLNFSNHVIAKNFDPHACGWAFGMNVFDLAE WKRQNITQIYHSWQKLNQDRSLWKLGTLPPGLITFWNKTFPLSRSWHVLGLGYNPHVNSRDIERAAVIHYNGNMKPWLE | |||
| Full Sequence |
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| Protein Sequence Length: 225 Download |
| MIDYYFGTNR ANPDSNLKYR NPKYLSILNH LRFYLPEIYP KLDKMVFLDD DIVVKKDLTG 60 LWSINMKGKV NGAVETCGES FHRFDRYLNF SNHVIAKNFD PHACGWAFGM NVFDLAEWKR 120 QNITQIYHSW QKLNQDRSLW KLGTLPPGLI TFWNKTFPLS RSWHVLGLGY NPHVNSRDIE 180 RAAVIHYNGN MKPWLEIGLP KFQSYWSKYL DYDQPFLQEC NINP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02718 | PLN02718 | 3.0e-102 | 11 | 222 | 218 | + Probable galacturonosyltransferase | ||
| PLN02523 | PLN02523 | 5.0e-125 | 1 | 224 | 227 | + galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 1.0e-127 | 4 | 222 | 219 | + Probable galacturonosyltransferase | ||
| PLN02910 | PLN02910 | 5.0e-132 | 1 | 223 | 227 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 0 | 1 | 224 | 224 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN31213.1 | 0 | 1 | 224 | 426 | 649 | unknown [Zea mays] |
| GenBank | EEC83383.1 | 0 | 1 | 224 | 398 | 621 | hypothetical protein OsI_28798 [Oryza sativa Indica Group] |
| RefSeq | NP_001061555.1 | 0 | 1 | 224 | 420 | 643 | Os08g0327100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001148932.1 | 0 | 1 | 224 | 425 | 648 | transferase, transferring glycosyl groups [Zea mays] |
| RefSeq | XP_002444200.1 | 0 | 1 | 224 | 425 | 648 | hypothetical protein SORBIDRAFT_07g014890 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ss9_A | 0.0001 | 21 | 194 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ga8_A | 0.0003 | 21 | 194 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1g9r_A | 0.0003 | 21 | 194 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG891409 | 225 | 1 | 225 | 0 |
| JG936556 | 220 | 1 | 220 | 0 |
| CD440189 | 225 | 1 | 225 | 0 |
| CD440116 | 225 | 1 | 225 | 0 |
| FL733414 | 211 | 1 | 211 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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