y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00033501m |
Family | CE10 |
Protein Properties | Length: 262 Molecular Weight: 27405 Isoelectric Point: 6.0206 |
Chromosome | Chromosome/Scaffold: 026827 Start: 6310 End: 7095 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 50 | 258 | 0 |
EDVVYDAAHGLKLRVYRSAAAGGDAGKLPVLVYFHSGGFCLGTFAQPNFHSGCLRLASELPAVVLSADYRLGPEHRLPAAMDDAAAALSWLRGQAASALG SGVPHPWLAKSADFTRVFVAGESSGANMSHHVAVRRGSGQLPLDPLRIAGHVLLTPYFGGAERTAAEAAEPPAGAPFTPEMSDAMWRLSLPAGATRDHPA ANPFGPDSP |
Full Sequence |
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Protein Sequence Length: 262 Download |
MSGAGDTAPR VVEDYRGVIQ ILSDGTIVRS DPAVLRPPEC FPDVPGIQWE DVVYDAAHGL 60 KLRVYRSAAA GGDAGKLPVL VYFHSGGFCL GTFAQPNFHS GCLRLASELP AVVLSADYRL 120 GPEHRLPAAM DDAAAALSWL RGQAASALGS GVPHPWLAKS ADFTRVFVAG ESSGANMSHH 180 VAVRRGSGQL PLDPLRIAGH VLLTPYFGGA ERTAAEAAEP PAGAPFTPEM SDAMWRLSLP 240 AGATRDHPAA NPFGPDSPGL EP 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2272 | PnbA | 9.0e-5 | 59 | 123 | 65 | + Carboxylesterase type B [Lipid metabolism] | ||
pfam00135 | COesterase | 2.0e-5 | 60 | 122 | 63 | + Carboxylesterase family. | ||
PRK10162 | PRK10162 | 7.0e-7 | 79 | 178 | 101 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 2.0e-16 | 42 | 262 | 222 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 3.0e-35 | 80 | 262 | 184 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF82397.1 | 0 | 4 | 262 | 2 | 262 | unknown [Zea mays] |
GenBank | EAY72594.1 | 0 | 1 | 260 | 1 | 259 | hypothetical protein OsI_00460 [Oryza sativa Indica Group] |
RefSeq | NP_001042063.1 | 0 | 1 | 260 | 1 | 259 | Os01g0155000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002455176.1 | 0 | 4 | 261 | 2 | 268 | hypothetical protein SORBIDRAFT_03g005570 [Sorghum bicolor] |
RefSeq | XP_002455178.1 | 0 | 4 | 262 | 2 | 251 | hypothetical protein SORBIDRAFT_03g005590 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 9.99995e-41 | 50 | 258 | 56 | 254 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 2o7r_A | 9.99995e-41 | 50 | 258 | 56 | 254 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_F | 1e-35 | 11 | 256 | 22 | 275 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_E | 1e-35 | 11 | 256 | 22 | 275 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_D | 1e-35 | 11 | 256 | 22 | 275 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CT846193 | 264 | 1 | 260 | 0 |
CA265367 | 208 | 1 | 206 | 0 |
DV538125 | 265 | 7 | 261 | 0 |
DV509896 | 265 | 7 | 261 | 0 |
DR961945 | 265 | 7 | 261 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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