| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00033589m |
| Family | AA1 |
| Protein Properties | Length: 615 Molecular Weight: 63800.4 Isoelectric Point: 6.0577 |
| Chromosome | Chromosome/Scaffold: 026986 Start: 4650 End: 7934 |
| Description | laccase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 1 | 501 | 0 |
| LCSTTSIIAVNGQLPGPSIEVNEGDAVEVKVINNSPYNVTIHWHGVLQLMTPWADGPSLVSQCPIQPSGSYTYRFSVPGQEGTLWWHAHSSFLRATVYGA FIVRPRAGNAYPFPAPDMEVPIVLGEWWNRNVVDVESDALLAGQLPAQSDAFTVNGKTGLLYPCANDTFTAVVEPNARVLLRVINAGLNSHLFFKVAGHN FTVVAVDAGYTSNLSTDTLVLAPGQTVDALVDTAAAPGSYYMAVQAHDTMSPLTFAASDTTTATAILQYNGTSTSPPAMPAMPSSSDAATANAFYFGLRG LGAPAVPSPVDVSMTIELGLGQLPCDPSQTRCNGTAAAAAMNGVSFRLPGPEASLLGAHVNGLTGVFTADFPDAPPPSGTAMAVGTRVRRLSFNSVVEIV LQNPSAVPTENHPIHLHGFNFFVLAQGVGPFTPGSVAYNLVDPVARNTIAVPGGGWAVIRFVANNPGMWFFHCHLDPHVPMGLGMVFHVDSGTTPGSTLP P | |||
| Full Sequence |
|---|
| Protein Sequence Length: 615 Download |
| LCSTTSIIAV NGQLPGPSIE VNEGDAVEVK VINNSPYNVT IHWHGVLQLM TPWADGPSLV 60 SQCPIQPSGS YTYRFSVPGQ EGTLWWHAHS SFLRATVYGA FIVRPRAGNA YPFPAPDMEV 120 PIVLGEWWNR NVVDVESDAL LAGQLPAQSD AFTVNGKTGL LYPCANDTFT AVVEPNARVL 180 LRVINAGLNS HLFFKVAGHN FTVVAVDAGY TSNLSTDTLV LAPGQTVDAL VDTAAAPGSY 240 YMAVQAHDTM SPLTFAASDT TTATAILQYN GTSTSPPAMP AMPSSSDAAT ANAFYFGLRG 300 LGAPAVPSPV DVSMTIELGL GQLPCDPSQT RCNGTAAAAA MNGVSFRLPG PEASLLGAHV 360 NGLTGVFTAD FPDAPPPSGT AMAVGTRVRR LSFNSVVEIV LQNPSAVPTE NHPIHLHGFN 420 FFVLAQGVGP FTPGSVAYNL VDPVARNTIA VPGGGWAVIR FVANNPGMWF FHCHLDPHVP 480 MGLGMVFHVD SGTTPGSTLP PPPADWVGVC DAQSYAAAAA AEVAPATAPV LSPAPAPALS 540 PASAPGPANS PRAGGSPVIP PRAVDHKPSP NLPQHREDGL PSSRSAAGPR AAGHLTGLLC 600 IILLLLFVLH EHKA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02835 | PLN02835 | 6.0e-39 | 7 | 469 | 477 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 6.0e-44 | 7 | 469 | 476 | + copper ion binding / oxidoreductase | ||
| pfam07732 | Cu-oxidase_3 | 2.0e-47 | 1 | 108 | 110 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03388 | ascorbase | 2.0e-71 | 2 | 487 | 532 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 1 | 490 | 511 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL73970.1 | 0 | 1 | 505 | 54 | 559 | AF465470_1 laccase LAC5-4 [Lolium perenne] |
| GenBank | EEC71811.1 | 0 | 1 | 505 | 45 | 555 | hypothetical protein OsI_04449 [Oryza sativa Indica Group] |
| RefSeq | NP_001044815.1 | 0 | 1 | 505 | 45 | 555 | Os01g0850700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001105789.1 | 0 | 1 | 614 | 39 | 641 | laccase 1 [Zea mays] |
| RefSeq | XP_002456640.1 | 0 | 1 | 614 | 39 | 649 | hypothetical protein SORBIDRAFT_03g039970 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 2 | 487 | 19 | 521 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| PDB | 1asq_A | 0 | 2 | 487 | 19 | 521 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| PDB | 1asp_B | 0 | 2 | 487 | 19 | 521 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| PDB | 1asp_A | 0 | 2 | 487 | 19 | 521 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
| PDB | 1aso_B | 0 | 2 | 487 | 19 | 521 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complex With Substrate |
