Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00033636m |
Family | GH27 |
Protein Properties | Length: 221 Molecular Weight: 24612.8 Isoelectric Point: 5.0739 |
Chromosome | Chromosome/Scaffold: 0266498 Start: 40 End: 1629 |
Description | alpha-galactosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 54 | 130 | 3.9e-29 |
AEYARPGGWNDPDMLEVGNGAMTNSEYVVHFSLWAMSKAPLIIGCDVRHMSQETYDILANKEVIAVNQDPLGVQGKK |
Full Sequence |
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Protein Sequence Length: 221 Download |
MKAGRPIYFS LCEWGDIHPA RWGAAYGNSW RTTNDIADNW ESMIATADQN EVWAEYARPG 60 GWNDPDMLEV GNGAMTNSEY VVHFSLWAMS KAPLIIGCDV RHMSQETYDI LANKEVIAVN 120 QDPLGVQGKK VRMEGSNEIW AAPLSDYRTA VVLLNRHATD GATITAHWDD VGLPAGLDVE 180 ARDLWQHKTL DGAFTDRMAF DVAARSCRMF VLRPRLPMKA * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02899 | PLN02899 | 1.0e-9 | 4 | 120 | 139 | + alpha-galactosidase | ||
PLN03231 | PLN03231 | 8.0e-12 | 3 | 125 | 146 | + putative alpha-galactosidase; Provisional | ||
PLN02229 | PLN02229 | 7.0e-90 | 4 | 214 | 214 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 5.0e-100 | 1 | 215 | 215 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 2.0e-115 | 1 | 214 | 214 | + alpha-galactosidase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG13536.1 | 0 | 1 | 220 | 190 | 412 | AC023240_9 putative alpha-galactosidase [Oryza sativa Japonica Group] |
GenBank | ACF78913.1 | 0 | 1 | 219 | 196 | 414 | unknown [Zea mays] |
EMBL | CAF34023.1 | 0 | 1 | 214 | 191 | 403 | alpha-galactosidase 1 [Pisum sativum] |
RefSeq | NP_001147362.1 | 0 | 1 | 219 | 194 | 412 | alpha-galactosidase [Zea mays] |
RefSeq | XP_002467021.1 | 0 | 1 | 219 | 191 | 409 | hypothetical protein SORBIDRAFT_01g018410 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 4 | 214 | 154 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 2.94273e-44 | 2 | 210 | 156 | 388 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 3e-33 | 3 | 215 | 163 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 3e-33 | 3 | 215 | 163 | 387 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 4e-30 | 2 | 161 | 162 | 330 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
ajugose biosynthesis II (galactinol-independent) | RXN-8285 | EC-2.4.1 | ajugose synthase |
ajugose biosynthesis II (galactinol-independent) | RXN-8286 | EC-2.4.1 | verbascose synthase |
ajugose biosynthesis II (galactinol-independent) | RXN-8287 | EC-2.4.1 | stachyose synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL857528 | 220 | 2 | 221 | 0 |
DN142204 | 197 | 1 | 197 | 0 |
FF358571 | 214 | 1 | 214 | 0 |
HO157233 | 214 | 1 | 214 | 0 |
HO146450 | 214 | 1 | 214 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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