Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00033704m |
Family | GH17 |
Protein Properties | Length: 402 Molecular Weight: 43152.6 Isoelectric Point: 8.5648 |
Chromosome | Chromosome/Scaffold: 027372 Start: 897 End: 4391 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 69 | 367 | 0 |
IGVNYGQIANNLPSPARVSWLLRSMRISKVKLYDADPNAVPAMASPAAAQAWLQQHLVPHLRAGARVTCVTVGNEVFKGNDTALQAAVLPAMESVHAALS ALGLRDRVNVTTAHSLDIMGASFPPSAGAFRPAALPHLRPFLGFLSATRAPFLINCYPYFAYRDDPARVPLEYALLQPNAAGVADPHTGLRYDNMLYAQV DAVYAAIQALGHTDVEVVVSETGWPSRGDPDEPGATPENAGTYVRNLLRRVEAGQGTPRRPAAPVGVYVFELFNENLKPGPASERNYGLFYPDGTPVYN |
Full Sequence |
---|
Protein Sequence Length: 402 Download |
MVLLTPFLCC LANAILELES MILVQSPIHS GQLVRNRMRV ALHRLKQARW NVLQLARPGE 60 VAVAELLSIG VNYGQIANNL PSPARVSWLL RSMRISKVKL YDADPNAVPA MASPAAAQAW 120 LQQHLVPHLR AGARVTCVTV GNEVFKGNDT ALQAAVLPAM ESVHAALSAL GLRDRVNVTT 180 AHSLDIMGAS FPPSAGAFRP AALPHLRPFL GFLSATRAPF LINCYPYFAY RDDPARVPLE 240 YALLQPNAAG VADPHTGLRY DNMLYAQVDA VYAAIQALGH TDVEVVVSET GWPSRGDPDE 300 PGATPENAGT YVRNLLRRVE AGQGTPRRPA APVGVYVFEL FNENLKPGPA SERNYGLFYP 360 DGTPVYNAGV HGYLPPMLAA SNAAPQVAIR PLFSSASSGF V* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-7 | 135 | 361 | 231 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-90 | 69 | 367 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH67163.1 | 0 | 62 | 397 | 35 | 387 | H0717B12.10 [Oryza sativa (indica cultivar-group)] |
GenBank | EAY86149.1 | 0 | 63 | 387 | 33 | 374 | hypothetical protein OsI_07522 [Oryza sativa Indica Group] |
RefSeq | NP_001047027.1 | 0 | 63 | 387 | 33 | 374 | Os02g0532900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001052739.1 | 0 | 62 | 397 | 35 | 387 | Os04g0412300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002452203.1 | 0 | 63 | 401 | 45 | 407 | hypothetical protein SORBIDRAFT_04g021700 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 69 | 366 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 69 | 366 | 3 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 69 | 366 | 3 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 69 | 366 | 3 | 310 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 69 | 366 | 3 | 310 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |