| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00034065m |
| Family | GT1 |
| Protein Properties | Length: 538 Molecular Weight: 59622 Isoelectric Point: 6.3602 |
| Chromosome | Chromosome/Scaffold: 026569 Start: 2161 End: 7147 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 250 | 525 | 3e-32 |
| LLLYGFSKEIVECPGYWPSSAHACGFWFLPTAWQFSCDKCMELSRNMNFSLGSVMCAKHSSMEHFLVGNSYSSRPIFVGLSSIGSMGFLRNPKAFLMVLK AAIESTDYRFILISSGYQPLDSAIRSIASSVTESSEAEASSLSDDSILLFNGRLFCFSGSVPYSWLFPRCAAAIHHAGSGSTAAALLAGIPQVVCPFLLD QFYWAERLHWLGVAPAPLQRQHLIPDNDDPSSIHNAAEMLRGAIKSALLPEIKAQATRIADRLSFEDGIGEALRNL | |||
| Full Sequence |
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| Protein Sequence Length: 538 Download |
| MAGGGGGGRP RAVFMAFGTR GDVFPVAALA AAFARDQQQY AVVFITHSAH RSLSAHLAAS 60 NVRYIPVSSP PVLAAEKVEN ISGGSQSNHE DESFSSRKMI IQMEHRKECL SSVEEVFGDD 120 PSTNGDFVVI NFFALEGWHI AELFQVKCII AAPYFLPYSA PSSFQRQFKH NFPLLYKYFQ 180 EAPANTVCWT DIIHWMWALF TESWGSWRSN YLNLSPIPFT AGRIIYYEFM IIFDPVTNLP 240 LWHVREESPL LLYGFSKEIV ECPGYWPSSA HACGFWFLPT AWQFSCDKCM ELSRNMNFSL 300 GSVMCAKHSS MEHFLVGNSY SSRPIFVGLS SIGSMGFLRN PKAFLMVLKA AIESTDYRFI 360 LISSGYQPLD SAIRSIASSV TESSEAEASS LSDDSILLFN GRLFCFSGSV PYSWLFPRCA 420 AAIHHAGSGS TAAALLAGIP QVVCPFLLDQ FYWAERLHWL GVAPAPLQRQ HLIPDNDDPS 480 SIHNAAEMLR GAIKSALLPE IKAQATRIAD RLSFEDGIGE ALRNLKDRVL VQDQPEV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 0.0009 | 408 | 462 | 55 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| cd03784 | GT1_Gtf_like | 3.0e-27 | 10 | 521 | 512 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR36224.1 | 0 | 13 | 534 | 14 | 523 | unknown [Zea mays] |
| EMBL | CBI23867.1 | 0 | 15 | 533 | 1 | 481 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_568452.2 | 0 | 12 | 531 | 12 | 512 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002273501.1 | 0 | 9 | 533 | 277 | 782 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002528612.1 | 0 | 9 | 529 | 10 | 508 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1iir_A | 0.00000000002 | 405 | 537 | 287 | 405 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 3h4t_A | 0.0000000003 | 408 | 515 | 274 | 368 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 3h4i_A | 0.0000000003 | 408 | 515 | 274 | 368 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1pnv_B | 0.00000002 | 309 | 532 | 211 | 390 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1pnv_A | 0.00000002 | 309 | 532 | 211 | 390 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CA616406 | 362 | 9 | 368 | 0 |
| JK551674 | 216 | 64 | 279 | 0 |
| EE177484 | 273 | 13 | 284 | 0 |
| CA616408 | 183 | 187 | 368 | 0 |
| JK551674 | 30 | 274 | 303 | 0.0000004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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