Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00034186m |
Family | GT37 |
Protein Properties | Length: 529 Molecular Weight: 58759.7 Isoelectric Point: 7.8238 |
Chromosome | Chromosome/Scaffold: 027308 Start: 1298 End: 3177 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT37 | 36 | 495 | 0 |
RSNITADHLLDGLLTADFTYGSCRSRYEFAGYNKESSHKPSPYLIAKLRKQEALQKRCGPGTAAYKEAVRRLDSGEGVVDDGCRYLVYISYRGLGNRMLA ITSSFLYAVLTERVLLVDGGSDAADLFCEPFPGTTWLLPRPGWFSFSPLRRLQGYLGGSKQSLGDMLRSGAVAVSADGNVSWSAPPRPPPYLYLHLSGGS GYGFHEKLFFCGAHQRLLGEVPWLFMWTDNYIVPGLFLTPPFTGELEAMFPEKDAVFHHLGRYLFHPTNPVWHAVTSYYRSTLAGSAQRVGVQIRVFHKE QPPQAVLEQVLSCVRGERLLPETTTAGGNASGTPSHAVLVTSLSSWYYERIRDEYGGRVAGGVHQPSHEGRQRWRDAAHDMRALSEMYLLSMCDVLVTSG YSTFGYVAQGLAWRRPCVMPRAPMWSDDWREGLDPRDMPCRRAASVEPCFHSPSAYDCAA |
Full Sequence |
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Protein Sequence Length: 529 Download |
MANTLFPVVE RLASYRQNAG EEHCAAIPLA ADWDPRSNIT ADHLLDGLLT ADFTYGSCRS 60 RYEFAGYNKE SSHKPSPYLI AKLRKQEALQ KRCGPGTAAY KEAVRRLDSG EGVVDDGCRY 120 LVYISYRGLG NRMLAITSSF LYAVLTERVL LVDGGSDAAD LFCEPFPGTT WLLPRPGWFS 180 FSPLRRLQGY LGGSKQSLGD MLRSGAVAVS ADGNVSWSAP PRPPPYLYLH LSGGSGYGFH 240 EKLFFCGAHQ RLLGEVPWLF MWTDNYIVPG LFLTPPFTGE LEAMFPEKDA VFHHLGRYLF 300 HPTNPVWHAV TSYYRSTLAG SAQRVGVQIR VFHKEQPPQA VLEQVLSCVR GERLLPETTT 360 AGGNASGTPS HAVLVTSLSS WYYERIRDEY GGRVAGGVHQ PSHEGRQRWR DAAHDMRALS 420 EMYLLSMCDV LVTSGYSTFG YVAQGLAWRR PCVMPRAPMW SDDWREGLDP RDMPCRRAAS 480 VEPCFHSPSA YDCAAGRDVD LDKVTPYIRR CVDVKCGIKL VNASSSQW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd11548 | NodZ_like | 0.0008 | 128 | 167 | 41 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
cd11548 | NodZ_like | 8.0e-5 | 295 | 446 | 155 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
pfam03254 | XG_FTase | 0 | 36 | 495 | 471 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
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GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC72905.1 | 0 | 37 | 528 | 107 | 601 | hypothetical protein OsI_06731 [Oryza sativa Indica Group] |
RefSeq | NP_001046540.1 | 0 | 37 | 528 | 107 | 601 | Os02g0275200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002453687.1 | 0 | 34 | 528 | 93 | 585 | hypothetical protein SORBIDRAFT_04g010420 [Sorghum bicolor] |
RefSeq | XP_002453688.1 | 0 | 38 | 528 | 78 | 566 | hypothetical protein SORBIDRAFT_04g010430 [Sorghum bicolor] |
RefSeq | XP_002453689.1 | 0 | 35 | 528 | 78 | 570 | hypothetical protein SORBIDRAFT_04g010630 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CJ894330 | 254 | 275 | 524 | 0 |
HX108473 | 208 | 257 | 461 | 0 |
GT043638 | 331 | 128 | 448 | 0 |
CJ617853 | 220 | 310 | 525 | 0 |
CJ721833 | 213 | 314 | 522 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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